Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq62 84.2 3e-11 >seq62 Length=7066 Score = 84.2 bits (92), Expect = 3e-11 Identities = 130/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 197029 TCGTCGCTAAAGCCCGTACCGATCTTACAAATGGATTCGTACATCTGGTTGTCGGGATTG 197088 || ||||| ||||| || ||||| || || | || ||||| || | || |||||| Sbjct 865 TCCTCGCTGAAGCCTGTGCCGATGTTGCAGACGGTCTCGTAGCGCTCGGTGGACGGATTG 924 Query 197089 TAACAGGCGAGTAAGAAAGCGCCGTAGGTTCCCGTTCTCTTTCCCACCCCGTTGAAGCCT 197148 || || ||||| |||||||||||||| | |||| ||| ||| ||| | | || | Sbjct 925 TAGCACGCGAGCAAGAAAGCGCCGTACACGCTGGTTCGCTTACCCTTCCCATGGTAGGCG 984 Query 197149 CCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCATGTAATCTTTCTTCAGTTTG 197208 || | || || |||||||| | ||||| | || | | ||| || ||||| | ||| Sbjct 985 CCCAGCACGACGAGATCCAGCGAGTCGCCGATTCCGGCGAGGTAGTCCTTCTTGATCTTG 1044 Query 197209 AGCCAG 197214 |||||| Sbjct 1045 AGCCAG 1050 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676699705469920