Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq2445 201 2e-46 seq1566 158 2e-33 >seq2445 Length=7783 Score = 201 bits (222), Expect = 2e-46 Identities = 559/845 (66%), Gaps = 18/845 (2%) Strand=Plus/Minus Query 47840 TGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCC 47899 |||||||| | || | ||||| |||||||| ||||| || ||| |||||||||||| Sbjct 852 TGGTAGTCGGCGACACGCTTCTCGAAGAAGTTGGTCTTTCCTGCCAGGGAGATGTTCTCC 793 Query 47900 ATGAAGAGGAAGGGGTTGGGTGTGTTATACACC--CGTGTCAGGCCCATCTGTTCCAGCA 47957 |||||| |||||||||| | || || | | | || | || | ||||| Sbjct 792 ATGAAGTCAAAGGGGTTGGTAGACTTGTAGAACTTCTCGTTA--CCGAGGGAAAGCAGCA 735 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 | || |||||| | |||||||||| ||| | | || ||||||||| | || | Sbjct 734 GCCTGTCGGCGACGAATTCGATGTATTGCTTCATCAAGTTGGCGTTCATGCCGAGCAGCG 675 Query 48018 -ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076 ||| ||| | |||| ||| | ||||| | ||| ||| || || || | | Sbjct 674 CACATGGG-AGTGCCTCTGTCAAGAACTCTTGCTCGATCGCGACAGCCTCGGTGATGACA 616 Query 48077 TGCTTAAC-GCGGGACT-CTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGG 48134 | || || || | | || || ||| | ||||| || |||| | ||||| Sbjct 615 TCCTGGACAGCCTGCTTGCTTGGGCGGTGT--CTAAGGTG---GGAGAAGAGGAGGCAGG 561 Query 48135 CAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAG 48194 | ||||| |||| | || || || ||| ||||||| |||||||||| || |||| Sbjct 560 CGAAGTCAGTGTGGAGACCCTCATCGCGGGAGATGAGCTCGTTGGAGAAAGTCAGGCCAG 501 Query 48195 GCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGC 48254 ||||| || | || |||||||||||||| | ||||| ||||| ||||||||||| | Sbjct 500 CCATGAGACCACGCTTCTTGAGCCAGAAAATAGAGGCGAACGAGCCGGAGAAGAAGATAC 441 Query 48255 CCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCC 48314 |||| || || ||||| || || | || | || | | | ||||||| ||||| Sbjct 440 CCTCAACGGCAGCGAAGGCAACCAGGCGCTGGGCAAAGGTGGAATCCTTGTCTTGGATCC 381 Query 48315 AGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGA 48374 | | |||||||| ||||||||||||||||| || || ||||| ||||| ||||| Sbjct 380 ACCTGACAGCCCAGTCGGCCTTCTTCTTGATGCAAGGGATGGTCTCGATGGCATTGAAGA 321 Query 48375 GCTTCTTGCACT-CACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCA 48433 | | ||| || ||||| ||| | || || || || | ||| |||| Sbjct 320 GGTATGTGCGCTGGGCCTGC-TCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTCTCG 262 Query 48434 GAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGC 48493 | ||| | ||||| || ||| ||||| ||||||||| | ||||| | || Sbjct 261 GCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAGCGAGCCTCTGGGATTTGG 202 Query 48494 ACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAG 48553 || || || ||| | ||| || || ||||| ||||| || || || || || || ||| Sbjct 201 ACCTCACTGCTGAAGCGCTCGAGAAGGTTCTCGTTGACAATTCCGTCAGACGCGGCGAAG 142 Query 48554 AAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGA---GCATTCCAGCCC 48610 || || || || || | ||| | |||||| | || ||||| |||||| | Sbjct 141 AAAGCGAGAACGTGGGAGATGAAGTAGCGCTCATCGTCATTGAGACGGTTGTTCCAGTCG 82 Query 48611 TGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTG 48670 || | ||| ||| ||||| | || || |||||||||| ||||| || || ||| Sbjct 81 TGAAGGTCCTTGGAGAGGTCAATCTCCTCTGCAGTCCAGAAAGACGCTTCCGCCTTCTTG 22 Query 48671 TACAT 48675 ||||| Sbjct 21 TACAT 17 >seq1566 Length=8448 Score = 158 bits (174), Expect = 2e-33 Identities = 529/813 (65%), Gaps = 38/813 (5%) Strand=Plus/Minus Query 213480 GGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTC--CTGAGAGTCTGTGTACTCCA 213537 |||||||| | | |||| ||| || ||||| ||||| ||| ||| | | |||||| | Sbjct 8333 GGCAGGGCAAGGGATGCCAAGTTACACACGGCAACCTCATCTG-GAG-CAGAGTACTCGA 8276 Query 213538 TGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTG 213597 ||||| ||||||||||| || |||||||| || ||||||| ||||| ||| Sbjct 8275 CAATCTCCGTGCACAGGTTAGAGCTGCGGATGGTACCAAGGTTCTTCTGGTTGCTCTTGC 8216 Query 213598 CGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTA 213657 |||| || ||||||||| | |||| | ||| || ||||| ||| ||| | || | Sbjct 8215 GGTTGCAAGCATCCTTGTACAACATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAA 8156 Query 213658 TCTGGCTCCAGAGGTACCTGGCCTTGA--------CCACCCGCCTGACAGCTCCGGGCGT 213709 | | ||| || | | |||||||| | |||| || ||||| Sbjct 8155 TGGAGTACCAAAGCTTCTGGGCCTTGATAGTCTTGCGACCCTTCTT----CTCCGA---- 8104 Query 213710 AGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGG 213769 |||||| | |||||||| | | ||| || | || | || ||| ||| || Sbjct 8103 ---CTCGTATTTCTCGTAGAGAGCCTCGAACTCATCACCGTAAACGTCCGCCAATCCAGG 8047 Query 213770 ACAGGATGCGGGACACATGAGGCTCCAGTCCCCGT-CATCTCTGACTCTCTGCATGAACA 213828 || ||| |||||||| ||||||| |||| | |||| || | || |||||| | Sbjct 8046 GCATTCGTTGGGGCACATGAGAGTCCAGTCACCGTTCTTCTCA-ACACGCTTCATGAAGA 7988 Query 213829 GGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGT 213888 | ||||||| ||| || ||| ||||| ||| | || | || ||| || || Sbjct 7987 GATCCGGGATCCAGAGAGCGTAGAACAAGTCACGGGCACGGACTTCCTCCTTGCCGTGGT 7928 Query 213889 TTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAA 213948 | || | || || | || || |||| || |||||||| ||||| | ||||||||| | Sbjct 7927 TCTTCCTCAAGTCCAAGAACTCGAAGACATCAGCGTGCCATGGCTCAACGTAGATGGCGA 7868 Query 213949 AGGCGCCCGGCCTCTTG---CCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGC 214005 |||| || || | |||| || |||||||| || ||||| ||||||||| || Sbjct 7867 AGGCACCAGGGCGCTTGTTGCCACCCTGGTCAACGTATCTGGCAGTGTTGTTGAAGACGC 7808 Query 214006 GCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGG 214065 | || | ||| || | ||||| || | ||||||||| || || || || | |||| || Sbjct 7807 GGAGCATGGGAACGATACCGTTCGAGTTTCCGTTGGTACCGGCAATGTATGCACCGGTGG 7748 Query 214066 CCCTCAGGTTGCTCATGGAG----AGCCCTATGCCACCGGCGTACTTGGAGATCATGGCG 214121 | | || | | ||||| | || || || ||||| ||| ||||||||||| Sbjct 7747 CAC---GGATACG-ATGGATGTTCAATCCGATACCTCCGGCAGTCTTTGAGATCATGGCA 7692 Query 214122 CAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAG 214181 || | | | || || ||| || | || || || || | | || | ||||||| Sbjct 7691 CATGTCTTGAGTGTGTCATAGATACCCTCAATACTATCCTCCTTCATGTCGACCAAGAAG 7632 Query 214182 CAGCTCGAGAGCTGGGGCCTG-GACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGAT 214240 ||| || |||| | ||||| | | |||| ||||| || || ||| ||| || | Sbjct 7631 CAGGATGACAGCT-GAGCCTGTGGTGTACCAGCATTGAAGAGTGTTGGGGAGGCGTGTGT 7573 Query 214241 CATAAACTTGTTAGAGAGGAGCCTGTAGGTCTC 214273 | | ||| ||| | ||| |||| ||||| Sbjct 7572 GAAGTATTTGGAAGACATGAGGTTGTATGTCTC 7540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931491649538560