Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq1566 221 2e-52 seq2445 215 1e-50 >seq1566 Length=8448 Score = 221 bits (244), Expect = 2e-52 Identities = 655/990 (66%), Gaps = 45/990 (5%) Strand=Plus/Minus Query 221702 AGGGCAACGCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTG--GTATACTGTATGA 221759 ||||||| | |||| |||||||||||| ||||| || || | | |||| | | Sbjct 8330 AGGGCAAGGGATGCCAAGTTACACACGGCAACCTCATC--TGGAGCAGAGTACTCGACAA 8273 Query 221760 TCTCTGTACAGAGGTT---GCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGC 221816 |||| || || ||||| ||||| |||||| || |||| || || || ||||| Sbjct 8272 TCTCCGTGCACAGGTTAGAGCTGCG---GATGGTACCAAGGTTCTTCTGGTTGCTCTTGC 8216 Query 221817 GATTGGCAGCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAA 221876 | ||| ||| |||||||| | ||| || || || ||||| ||||| | | |||| Sbjct 8215 GGTTGCAAGCATCCTTGTACAACATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAA 8156 Query 221877 TCTTGTCCCAGAGTTCTCTGGCGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCAT 221936 | || ||| || | ||||| || | ||||| ||||| |||| || Sbjct 8155 TGGAGTACCAAAGCT-TCTGGGCCTTGA--TAGTCTTGCG---ACCCT---TCTTCTCCG 8105 Query 221937 ACCCG--------GTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGG 221988 || || ||| ||||| | | |||| |||||||| | || ||| || || Sbjct 8104 ACTCGTATTTCTCGTAGAGAGCCT--CGAACTCATCACCGTAAACGTCCGCCAATCCAGG 8047 Query 221989 ACACCTGGCGGGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAG 222048 || | ||| ||||| ||| |||||| ||| | | || | || ||||||||| Sbjct 8046 GCATTCGTTGGGGCACATGAGAGTCCAGTCACCGTTCTTCTCAACACGCTTCATGAAGAG 7987 Query 222049 GTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTT 222108 ||||||||||| || || | || | || | || || |||||| ||||| ||| Sbjct 7986 ATCCGGGATCCAGAGAGCGTAGAACAAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTT 7927 Query 222109 TTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAG 222168 ||||||| ||||| ||||| || | ||||||||||| ||||| | |||| ||| | Sbjct 7926 CTTCCTCAAGTCCAAGAACTCGAAGACATCAGCGTGCCATGGCTCAACGTAGATGGCGAA 7867 Query 222169 AGCGCCGGGTCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGC 222227 || || || ||||||||||||||||| || || || ||| | |||||||| || Sbjct 7866 GGCACCAGGGCGCTTGTTGCCACCCTGGTCAACGTATCT-GGCAGTGTTGTTGAAGACGC 7808 Query 222228 GAAGGGTCGGTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGG 222287 | || | || || | ||||| || |||||||| || |||||| |||||| || Sbjct 7807 GGAGCATGGGAACGATACCGTTCGAGTTTCCGTTGGTACCGGCAATGTATGCACCGGTGG 7748 Query 222288 CCCTCAGGTTAC--TGGCAG-ACATGCCGATACCACCGGC-GTGTTTCGAGATCATGGCG 222343 | | || ||| ||| | || |||||||| ||||| || ||| ||||||||||| Sbjct 7747 CAC---GGATACGATGGATGTTCAATCCGATACCTCCGGCAGTCTTT-GAGATCATGGCA 7692 Query 222344 CAGCTCTTGAGAGTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAA 222403 || ||||||| ||||| ||| ||||| ||| |||||||| | || | || || Sbjct 7691 CATGTCTTGAGTGTGTCATAGATACCCTCAATACTATCCTCCTTCATGTCGACCAAGAAG 7632 Query 222404 CAAGACGACATCTGAG-ATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGT 222462 || || |||| ||||| | ||||| | || || || || || || || ||||||||| Sbjct 7631 CAGGATGACAGCTGAGCCTGTGGTGTACCA-GCATTGAAGAGTGTTGGGGAGGCGTGTGT 7573 Query 222463 AAAGTAGCCCCTAGACATCAGATCGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTG 222522 ||||| |||||| || | ||| ||||| | | | | | || | || ||||| Sbjct 7572 GAAGTATTTGGAAGACATGAGGTTGTATGTCTCAATGGCCTTCTCAATATCCTCGCCGTG 7513 Query 222523 AATCTGCATGGCGCATCTCATGTACATGTACTGGGGCCTCTC--CACAGGACCCTTGGAG 222580 ||| | || | ||| ||||| ||| ||||| || || | || | || Sbjct 7512 AATGCCAACCGCCACACGCATAATCATGTGCTGTGGCCTTTCAGCAACGTTGCCATCAAG 7453 Query 222581 CTGGAGAGCAGGTACGATTTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCT 222640 ||||| ||||| || || || |||||||| ||||| || | | || || || Sbjct 7452 GCGGAGA--AGGTATGAACGCTCAAGGGTCTTGAAGCCAAAATATTGGTAGTTGAAATCA 7395 Query 222641 CTGCCGTGAACCACGGCGGCGTCCAGCTCC 222670 | | ||| || ||||| | || |||||| Sbjct 7394 CGGTCGTAAAGGACGGCAGAGTTAAGCTCC 7365 >seq2445 Length=7783 Score = 215 bits (238), Expect = 1e-50 Identities = 564/857 (66%), Gaps = 22/857 (3%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| |||||||||||||||| || || |||||| || || |||||||| || Sbjct 8 ATCTGGCAGATGTACAAGAAGGCGGAAGCGTCTTTCTGGACTGCAGAGGAGATTGACCTC 67 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGT-- 25594 |||||||| | ||| |||| || | ||| ||||| ||| | ||| | Sbjct 68 TCCAAGGACCTTCACGACTGGAACAACCGTCTCAATGACGATGAGCGCTACTTCATCTCC 127 Query 25595 -ACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 |||| | || ||||| || || ||||| || || || |||||||| || |||| | Sbjct 128 CACGTTCTCGCTTTCTTCGCCGCGTCTGACGGAATTGTCAACGAGAACCTTCTCGAGCGC 187 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713 |||| ||| || || || | ||||| || |||||||||||||| || ||| Sbjct 188 TTCAGCAGTGAGGTCCAAATCCCAGAGGCTCGCTGCTTCTACGGTTTCCAAATCATGATC 247 Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACGTC 25770 || || | ||| | ||| || || || || || || ||||| | || Sbjct 248 GAGAACATTCACGCCGAGACATACTCC---CTCCTCATCGACACATACATCAAGGAGCAG 304 Query 25771 GCCGAGAG-AGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGC 25829 ||| || | | || || || |||||||||| ||| || ||||||||| |||||| Sbjct 305 GCCCAGCGCACATAC-CTCTTCAATGCCATCGAGACCATCCCTTGCATCAAGAAGAAGGC 363 Query 25830 GCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGC 25889 ||||| | | ||||||| | | || | || |||| | |||| ||||| || Sbjct 364 CGACTGGGCTGTCAGGTGGATCCAAGACAAGGATTCCACCTTTGCCCAGCGCCTGGTTGC 423 Query 25890 CTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAA 25949 ||| ||||| || ||||| ||||| ||| ||| ||||| || | || ||||||||||| Sbjct 424 CTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGCTCGTTCGCCTCTATTTTCTGGCTCAA 483 Query 25950 GCAGAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCATCAGCAGGGACGAGG 26008 | || || |||| | || ||| ||||| ||||||||||||||| | | || |||| Sbjct 484 GAAGCGTGGTCTCATGGCTGGCCTG-ACTTTCTCCAACGAGCTCATCTCCCGCGATGAGG 542 Query 26009 GTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCTC 26068 ||||||||| || || |||||||| |||| | | |||| | ||| || | Sbjct 543 GTCTCCACACTGACTTCGCCTGCCTCCTCTTCTC---CCACCTTAGACAC-CGCCCAAGC 598 Query 26069 AAG-AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNNN 26127 ||| || | ||| | | |||||| |||||||| | ||||||| | ||||| Sbjct 599 AAGCAGGCTGTCCAGGATGTCATCACCGAGGCTGTCGCGATCGAGCAAGAGTTCTTGACA 658 Query 26128 NNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTGAG 26187 | ||||||||| || | |||| |||||||| || Sbjct 659 GAGGCACTCCCATGTGCGCTGCTCGGCATGAACGCCAACTTGATGAAGCAATACATCGAA 718 Query 26188 TATGTGGCCGACCATCTGCTG--TGCCAGCTGGGACTCGCCAGACTCTACAGTACGCCTA 26245 | || |||||| |||||| | || || || || | |||||| | | | Sbjct 719 TTCGTCGCCGACAGGCTGCTGCTTTCC--CTCGGTAACGAGAAGTTCTACAAGTCTACCA 776 Query 26246 ACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAGA 26305 |||| || ||||| ||||| ||||| || ||| ||| |||||||||||||| || ||| Sbjct 777 ACCCCTTTGACTTCATGGAGAACATCTCCCTGGCAGGAAAGACCAACTTCTTCGAGAAGC 836 Query 26306 GGGTCGGCGACTATCAA 26322 | |||| |||||| ||| Sbjct 837 GTGTCGCCGACTACCAA 853 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928803768280960