Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq1566 221 1e-52 seq2445 125 9e-24 >seq1566 Length=8448 Score = 221 bits (244), Expect = 1e-52 Identities = 625/944 (66%), Gaps = 27/944 (3%) Strand=Plus/Plus Query 75146 TACTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCAACGGCTCGATGGCATCCTCATG 75205 || ||||| |||| ||||||||| || |||| || || ||||||| | | Sbjct 7411 TATTTTGGCTTCAAGACCCTTGAGCGTTCATACCTTCTCCGCCTTGATGGCAACGTTGCT 7470 Query 75206 GAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGAT 75265 |||| |||||| ||||| | ||||| || || | ||||| ||||| || || ||||| Sbjct 7471 GAAAGGCCACAGCACATGATTATGCGTGTGGCGGTTGGCATTCACGGCGAGGATATTGAG 7530 Query 75266 TCTGTCTTGGAGACATACGACAAGATGTC--CCAAGGTATGTTCATTCACGCAACACCAA 75323 | | | ||||||||| || ||||| |||| || |||| ||||| | |||| Sbjct 7531 AAGGCCATTGAGACATACAACCTCATGTCTTCCAAA-TAC-TTCACACACGCCTCCCCAA 7588 Query 75324 CCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACA 75383 | ||||||||||||||||||||| | ||| |||| |||||| | ||| || | Sbjct 7589 CACTCTTCAATGCTGGTACACCACAGGCTCAGCTGTCATCCTGCTTCTTGGTCGACATGA 7648 Query 75384 AGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGT 75443 ||||||| || | |||||||||| || || | | ||||| ||||||||| Sbjct 7649 AGGAGGATAGTATTGAGGGTATCTATGACACACTCAAGACATGTGCCATGATCTCAAAGA 7708 Query 75444 GGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGG 75503 || || ||||| || || |||||||| | | | |||| | ||| | Sbjct 7709 CTGCCGGAGGTATCGGATTGAACATCCATCGTATCCGTGCCACCGGTGCATACATTGCCG 7768 Query 75504 GGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGC 75563 | || || || | || | ||||| |||| ||||| ||||| || ||| ||| || Sbjct 7769 GTACCAACGGAAACTCGAACGGTATCGTTCCCATGCTCCGCGTCTTCAACAACACTGCCA 7828 Query 75564 GCTATGTAAATCAAGCGGGGCGTC----GCAAGGGGTCCATCGCGGTCTACTTGGAACCA 75619 | || || | || | | ||| | || || || |||| ||||| | || ||| Sbjct 7829 GATACGTTGACCAGG-GTGGCAACAAGCGCCCTGGTGCCTTCGCCATCTACGTTGAGCCA 7887 Query 75620 TGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCT 75679 ||||| || ||| || | |||||| | || || | ||||| || | || || | | Sbjct 7888 TGGCACGCTGATGTCTTCGAGTTCTTGGACTTGAGGAAGAACCACGGCAAGGAGGAAG-T 7946 Query 75680 CGGTGTA-GAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGA 75738 | ||| | || | || | | || ||||| || || || ||||||||||| ||||| Sbjct 7947 CCGTGCCCGTGACTTGTTCTACGCTCTCTGGATCCCGGATCTCTTCATGAAGCGTGTTGA 8006 Query 75739 GGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGAC-AAGGCACCAGGTCTCTCCGACGCGG 75797 | || ||| | ||| |||| | || || || || || || || | | |||| Sbjct 8007 GAAGAACGGTGACTGGACTCTCATGTGCCCCAACGAATGC-CCTGGATTGGCGGACGTTT 8065 Query 75798 TGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGA-----AGAGGA-GGGTAGAGCCA 75851 ||||| ||||| || || |||||| || || || ||| || |||| | || Sbjct 8066 ACGGTGATGAGTTCGAGGCTCTCTACGAGAAATACGAGTCGGAGAAGAAGGGTCG---CA 8122 Query 75852 ATGCGACTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACT 75910 | |||| | | || | | || | ||||| | | |||||| | || ||||| ||||| Sbjct 8123 A---GACTAT-CAAGGCCCAGAAGCTTTGGTACTCCATTCTCGAGTCTCAGACTGAGACA 8178 Query 75911 GGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTG 75970 |||| || | ||| | |||||||||||||| ||| ||||| ||||| ||||| | Sbjct 8179 GGAAACCCTTTCATGTTGTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTT 8238 Query 75971 GGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAG 76030 || || ||| ||||| || || |||||||| ||| | |||||| | | | |||||| Sbjct 8239 GGTACCATCCGCAGCTCTAACCTGTGCACGGAGATTGTCGAGTACTCTGCTCCAGATGAG 8298 Query 76031 ACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGT 76074 || || || || |||||||| | ||||| |||| ||| || Sbjct 8299 GTTGCCGTGTGTAACTTGGCATCCCTTGCCCTGCCAACGTACGT 8342 >seq2445 Length=7783 Score = 125 bits (138), Expect = 9e-24 Identities = 163/223 (73%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 64996 GCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC 65055 |||||| | || | || || || |||||||||| | ||||| | | ||| | | Sbjct 329 GCCATCGAGACCATCCCTTGCATCAAGAAGAAGGCCGACTGGGCTGTCAGGTGGATCCAA 388 Query 65056 -ACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTT 65114 |||| | || | |||| ||| ||||||| |||| || || || ||||||||||| Sbjct 389 GACAAGGATTC-CACCTTTGCCCAGCGCCTGGTTGCCTTCGCTGCCGTTGAGGGTATCTT 447 Query 65115 CTTCTCCGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCT 65174 ||||||||| || ||| | |||||| ||| | |||||||| ||||||||| | ||||| Sbjct 448 CTTCTCCGGCTCGTTCGCCTCTATTTTCTGGCTCAAGAAGCGTGGTCTCATGGCTGGCCT 507 Query 65175 ATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCAC 65217 ||||| || || || || ||||| ||||||||||||||| Sbjct 508 GACTTTCTCCAACGAGCTCATCTCCCGCGATGAGGGTCTCCAC 550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596543246537920