Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq2035 264 1e-65 seq1054 190 3e-43 seq335 176 6e-39 seq1897 116 5e-21 seq2400 107 3e-18 seq415 102 1e-16 seq567 98.7 1e-15 >seq2035 Length=5668 Score = 264 bits (292), Expect = 1e-65 Identities = 475/689 (69%), Gaps = 9/689 (1%) Strand=Plus/Plus Query 195302 ATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGTA 195361 || ||||||||||| || || || ||||| || || ||| | | | |||| || | Sbjct 1747 ATCGGTATCGATTTGGGTACCACCTACTCGTGCGTGGGTATCTTCAGAGATGACCGCATT 1806 Query 195362 GAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGAT 195421 ||||| || | || ||||| || ||||| ||||| ||||||| ||||||||| || || Sbjct 1807 GAGATCATTGCCAACGACCAGGGCAACCGCACAACCCCATCGTTCGTTGCCTTCACTGAC 1866 Query 195422 AATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACT 195481 | || ||||| | || |||||||| || || || || |||||||| | ||| || Sbjct 1867 ACCGAGCGTCTGATCGGTGATGCCGCCAAGAACCAAGTCGCCATGAACCCAAGCAACACC 1926 Query 195482 GTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGAT 195541 ||||| ||||| |||||||| || ||||||||||| | || | ||||| | ||| Sbjct 1927 GTCTTCGACGCCAAGCGTCTGATCGGTCGCAAGTTCGCCGACGCTGAGGTCCAGGCCGAC 1986 Query 195542 ATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAATGTT 195601 || ||| ||| | | | ||| | || | || || ||||| | | || Sbjct 1987 ATGAAGCACTTCCCCT-TCAAGATCATCGACAAG-GGAGGA-AAGCCAGTTTGCCAGGTC 2043 Query 195602 GAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATT 195661 || || | || |||| || | || | ||||| || || || || ||| | | | Sbjct 2044 GAGTTCAAGGGCGAGACCAAGGACTTCACACCCGAGGAGATCTCCTCCATGATCCTCGTC 2103 Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 |||||| ||||| || || | | | | || ||| || || | || ||||| || Sbjct 2104 AAGATGCGTGAGACCGCTGAGGCCTACCTCGGAGGAACCGTCAACAACGCTGTTGTCACC 2163 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || || |||||||||| || || || || ||||| || ||||| |||| | || || Sbjct 2164 GTCCCCGCTTACTTCAACGACTCCCAGCGCCAGGCCACCAAGGATGCTGGTCTGATCGCC 2223 Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841 || || ||| ||| | || ||||| || || || || ||||| |||||||| ||||| Sbjct 2224 GGACTCAACGTTCTCCGTATCATCAACGAGCCTACCGCCGCTGCCATTGCTTACGGTCTC 2283 Query 195842 GACAAGAACAAGGACGAAGATAAA---AATGTATTGATCTTTGATCTCGGTGGTGGTACG 195898 |||||||| || ||| | | | || || | ||||| ||||| |||||||| || Sbjct 2284 GACAAGAA---GGTCGAGGGTGAGCGCAACGTTCTCATCTTCGATCTTGGTGGTGGAACT 2340 Query 195899 TTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGT 195958 || |||||||| || |||| || || | ||||| ||||| || ||| | ||||||||| Sbjct 2341 TTCGATGTCTCTCTCCTCACCATCGAGGAGGGTATCTTCGAGGTCAAGTCCACTGCTGGT 2400 Query 195959 GATACTCATCTAGGTGGTGAAGATTTCGA 195987 || ||||| | |||||||| || ||||| Sbjct 2401 GACACTCACTTGGGTGGTGAGGACTTCGA 2429 >seq1054 Length=16682 Score = 190 bits (210), Expect = 3e-43 Identities = 182/233 (78%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||||||||| || || || || || ||||| || || || || || || |||| Sbjct 1493 GTGGTATGCAAATCTTCGTCAAGACTCTCACCGGAAAGACAATTACGCTGGAAGTCGAGT 1434 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 |||| || || ||||||||| |||| ||||||||||||||||||| ||||| ||||| | Sbjct 1433 CGTCGGATACCATCGATAACGTCAAGTCCAAGATTCAAGATAAGGAGGGCATCCCACCGG 1374 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | ||||| || || ||||| || || || ||||| || || || ||||| | |||||| Sbjct 1373 ACCAGCAGCGCCTGATTTTCGCGGGCAAGCAGCTCGAGGACGGCCGTACTTTGTCTGATT 1314 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 ||||| | || |||||||| || |||| |||||||| | || || |||||| Sbjct 1313 ACAACATCCAGAAGGAGTCCACATTACATCTTGTTCTCCGCCTCCGTGGTGGT 1261 Score = 163 bits (180), Expect = 4e-35 Identities = 176/233 (76%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| || || || || |||||||| || || || ||||| || ||||| || | Sbjct 1721 GTGGTATGCAGATTTTCGTCAAGACCCTTACGGGGAAGACGATCACGCTTGAGGTGGAAT 1662 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | || || || || || ||| | || | ||||||||||||||||| || ||||| || | Sbjct 1661 CATCCGATACCATTGACAACGTAAAGTCGAAGATTCAAGATAAGGAGGGTATTCCTCCGG 1602 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | ||||| || || || ||||||||||| ||||| || ||||| || ||| | | |||| Sbjct 1601 ACCAGCAGCGCCTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGCACCTTGTCCGATT 1542 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 ||||| |||| |||||||| || || || | || || | || || |||||| Sbjct 1541 ACAACATTCAGAAGGAGTCCACCCTGCATTTGGTGCTGCGTCTGCGTGGTGGT 1489 Score = 152 bits (168), Expect = 7e-32 Identities = 173/232 (75%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| || ||||| || ||| | |||||||| || || || ||||||||||||| Sbjct 1265 GTGGTATGCAGATTTTTGTCAAGACCTTGACTGGAAAGACCATTACTCTCGAGGTTGAGT 1206 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | || ||||| || || ||| |||| | ||||| || |||||||| || || ||||| | Sbjct 1205 CTTCTGACACCATTGACAACGTCAAGTCGAAGATCCAGGATAAGGAGGGTATCCCACCGG 1146 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | ||||| || || || ||||| || || ||||| || ||||| | || || || | Sbjct 1145 ACCAGCAGCGCCTGATCTTTGCCGGGAAGCAGCTCGAGGATGGGAGGACGCTGAGCGACT 1086 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 ||||| | || |||||| ||||| ||| | || || | ||||| ||||| Sbjct 1085 ACAACATCCAGAAGGAGAGCACTCTTCACTTGGTGCTCCGTCTTCGTGGTGG 1034 >seq335 Length=36749 Score = 176 bits (194), Expect = 6e-39 Identities = 177/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||||||||| ||||| ||||| || || || ||||||||||| ||||| |||||||| Sbjct 30202 ATGCAAATCTTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTCC 30261 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| || |||| ||||||| || || ||||| || ||||| || || ||| Sbjct 30262 GACACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAG 30321 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || || || || ||||| || ||||| || ||||| | || |||||| Sbjct 30322 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTTTCGGACTACAAC 30381 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGTGC 172091 | || |||||||| || || ||| | || | || ||||| || ||||| Sbjct 30382 ATCCAGAAGGAGTCCACCCTTCACTTGGTCTTGAGACTTCGTGGAGGTGC 30431 >seq1897 Length=18325 Score = 116 bits (128), Expect = 5e-21 Identities = 192/274 (70%), Gaps = 5/274 (2%) Strand=Plus/Minus Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778 ||||| || || ||||||| || || || ||||| || ||||| || | ||| ||| Sbjct 1280 ACTGTCCCAGCCTACTTCAACGACAACCAGCGTCAGGCTACCAAGGATGCCGGTGCCATT 1221 Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838 || || || ||| ||| | || ||||| || || || || || || |||||||| ||| Sbjct 1220 GCCGGCCTCAACGTTCTCCGTATCATCAACGAGCCTACCGCCGCCGCCATTGCTTACGGT 1161 Query 195839 CT-GGACAAGAACAAGGACG---AAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGG 195894 || || | | ||| || | || || || | |||| |||||||||||||| Sbjct 1160 CTCGGTGCCGGA-AAGTCCGCCAAGGAGCGTAACGTTCTCATCTACGATCTCGGTGGTGG 1102 Query 195895 TACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGC 195954 || || |||||||| || || || || | |||||| | ||| || ||||| ||||| Sbjct 1101 AACTTTCGATGTCTCCCTCCTGAACATCCAGGGTGGTGTCTTCACCGTCAAGGCCACTGC 1042 Query 195955 TGGTGATACTCATCTAGGTGGTGAAGATTTCGAT 195988 |||||| || || | ||||| | ||||||||| Sbjct 1041 TGGTGACACCCACTTGGGTGGACAGGATTTCGAT 1008 >seq2400 Length=6790 Score = 107 bits (118), Expect = 3e-18 Identities = 216/313 (69%), Gaps = 13/313 (4%) Strand=Plus/Minus Query 198549 ATCCCACGTGGTGCTCTTCTCGCCGGTGCCCCGGGTACTGGTAAAACCCTTCTAGCTCGT 198608 || || || |||||| | || | ||| | || || |||||||| ||||| ||||| Sbjct 3997 ATTCCCCGCGGTGCTATCCTGTCTGGTCCTCCCGGAACTGGTAAGACCCTCCTAGCGAAG 3938 Query 198609 GCTATCGCGGGTGAATCGAGTGTCCCCTTTCTTCAGTGCTCCGCGG---CGAGTTTCATC 198665 || | ||| || || || | || ||||| |||||| | || | || |||||| ||| Sbjct 3937 GCCACCGCCGGCGAGTCCGGCGTTCCCTT-CTTCAGCG-TCAGTGGTTCCGAGTT-CATG 3881 Query 198666 GAGATGTTCGTTGGTGTTGGTGCTAAGCGCGTCCGGGAACTCTTTGAGCAAGCACGTGAA 198725 ||||||||||| ||||| ||| || ||| || || || || || | || || | Sbjct 3880 GAGATGTTCGTCGGTGTCGGTCCTTCGCGTGTGCGCGACCTGTTCGCCATGGCCCGCAAG 3821 Query 198726 AATCAACCATGTATCATCTTCATTGATGAGATTGACGCTGTTGGTAAGAAGCGTGGTGGA 198785 | || |||||||||||||| || |||||||||||| | |||||| || | || Sbjct 3820 ACGACGCCGTGTATCATCTTCATCGACGAGATTGACGCTATCGGTAAG--TCGAGAGAGA 3763 Query 198786 ACT---ACTAC--ACCTGGTAATGATGAGCGTGAGCAGACGATTAACCAGCTTCTCACTG 198840 | | || | | |||||||| ||||| ||| ||| | |||||| | ||||| | Sbjct 3762 AGTCTGGCTTCGGAGGCGGTAATGAGGAGCGCGAGAGCACGCTGAACCAGATCCTCACGG 3703 Query 198841 AGATGGATGGTTT 198853 ||||||| || || Sbjct 3702 AGATGGACGGCTT 3690 >seq415 Length=14565 Score = 102 bits (112), Expect = 1e-16 Identities = 172/249 (69%), Gaps = 0/249 (0%) Strand=Plus/Plus Query 196629 CCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCAC 196688 ||| | || |||| ||| | | || |||| ||||| | || || || ||| | |||| Sbjct 6702 CCCATTCATAGGACAACAACCAGCTCGGAAAGTTCGAGCTTACTGGCATCCCACCCGCAC 6761 Query 196689 CCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGGAATTCTAAACG 196748 || | |||||||| || || | || | ||||| | || || || ||||| || || | Sbjct 6762 CCCGTGGTGTTCCCCAAATCGAGGTCTCTTTCGAGCTTGATGCCAACGGAATCCTCAAGG 6821 Query 196749 TCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGTGATTACCAATGACAAGG 196808 | || |||| ||||||| | || || ||||| || || ||||| ||||||| Sbjct 6822 TTACCGCTGGTGACAAGGGCACCGGAAAGTCTGAGTCCATCACCATCACCAACGACAAGG 6881 Query 196809 GGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGCGGAAAAGTACAGGGAAG 196868 | || ||| | ||||||| || || ||||||||||| || || || ||||| || | Sbjct 6882 GCCGTCTTACCCAGGAGGAGATCGACCGTATGGTTCAGGAGGCTGAGCAGTACGCCGATG 6941 Query 196869 AAGACGAGG 196877 | ||| ||| Sbjct 6942 AGGACAAGG 6950 Score = 100 bits (110), Expect = 4e-16 Identities = 220/326 (67%), Gaps = 3/326 (1%) Strand=Plus/Plus Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 |||||||||||| || || |||| | | ||||| | || | | || || || || Sbjct 5657 AAGATGAAGGAGGTCGCTGAGTCTTACCTCGGTAAGAAGGTTACCCACGCCGTCGTCACC 5716 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || || || ||||||| || || ||||||| || |||||||||| | ||||| Sbjct 5717 GTCCCCGCCTACTTCAACGACAACCAGAGACAGGCCACCAAGGACGCTGGTATCATTGCT 5776 Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841 || || ||| || | ||| |||| || || || || || || |||| || ||||| Sbjct 5777 GGACTTAACGTCCTCCGCATTGTCAACGAGCCTACCGCCGCCGCCCTTGCCTACGGTCTT 5836 Query 195842 GACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTT 195901 || |||| | | | | || | || |||| ||| ||||| ||||| || || || Sbjct 5837 GATAAGACCGATGGTG-AGCGCCAGAT-CATTG-TCTACGATCTTGGTGGAGGAACCTTC 5893 Query 195902 GATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGAT 195961 ||||| || || || ||||| |||| ||||| || |||| |||||||| Sbjct 5894 GATGTGTCTCTCCTGTCCATTGACCGTGGCGCTTTCGAGGTTCTTTCTACCGCTGGTGAC 5953 Query 195962 ACTCATCTAGGTGGTGAAGATTTCGA 195987 || || | |||||||| |||||||| Sbjct 5954 ACCCACTTGGGTGGTGAGGATTTCGA 5979 >seq567 Length=52013 Score = 98.7 bits (108), Expect = 1e-15 Identities = 221/329 (67%), Gaps = 10/329 (3%) Strand=Plus/Minus Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 |||||||||||||| || || | ||| | || | | || | || ||||| || Sbjct 10502 AAGATGAAGGAGACCGCCGAGGCCTTCCTTAACAAGCCAATCAAGAACGCCGTTGTTACC 10443 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || || |||||||||| || || || || || || || ||||| || | | ||||| Sbjct 10442 GTCCCAGCTTACTTCAACGACTCCCAGCGTCAAGCCACCAAGGATGCCGGTCAAATTGCT 10383 Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841 || || ||| ||| | | | || || || || || ||||| | ||||| |||||| Sbjct 10382 GGCCTGAACGTTCTCCGTGTCGTTAACGAGCCTACCGCCGCTGCTCTCGCTTACGGTCTG 10323 Query 195842 GACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTT 195901 || ||| | ||||| | || || | ||| ||||| ||||| || || || Sbjct 10322 GAGAAGGAGGAGGAC----AGAATCATCGCT--GTCTACGATCTGGGTGGAGGAACCTTC 10269 Query 195902 GATGTCTCACTTCTCAATAT--TGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTG 195959 ||| |||| ||||| | || |||| ||| | ||||| || ||| | || |||| Sbjct 10268 GATATCTCCGTTCTCGAGATCCAGAAG--GGTGTTTTCGAGGTTAAGTCCACCAACGGTG 10211 Query 195960 ATACTCATCTAGGTGGTGAAGATTTCGAT 195988 | ||||| | |||||||| ||||||||| Sbjct 10210 ACACTCACTTGGGTGGTGAGGATTTCGAT 10182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657833338928480