Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq1566 149 2e-30 seq1475 93.3 1e-13 seq9 93.3 1e-13 >seq1566 Length=8448 Score = 149 bits (164), Expect = 2e-30 Identities = 579/903 (64%), Gaps = 13/903 (1%) Strand=Plus/Minus Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689 ||| || |||||||| |||||||||||| || |||||| || | ||||||||||| Sbjct 8283 GTACTCGACAATCTCCGTGCACAGGTTAGAGCTGCGGATGGTACCAAGGTTCTTCTGGTT 8224 Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGC 155749 || | ||| |||||||||||||| | ||| | ||| |||||||||| |||| | Sbjct 8223 GCTCTTGCGGTTGCAAGCATCCTTGTACAACATGAAAGGGTTTCCTGTCTCAGTCTGAGA 8164 Query 155750 GTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCT-TCCG 155808 || ||||| ||| || | |||| || || |||| | || | | |||| Sbjct 8163 CTCGAGAATGGAGTACCAAAGCTTCTGGGCCTTGATAGTCTTG-CGACCCTTCTTCTCCG 8105 Query 155809 ACTCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGC 155868 |||| |||||| || || | | | || ||||||||| || || |||||||| Sbjct 8104 ACTCGTATTTCTCGTAGAGAGCCTCGAACTCATCACCGTAAACGTCCGCCAATCCAGGGC 8045 Query 155869 ACTTATCGGGGCAAAACAGCGACCA---AATTTTATTACCGATTACACGCTCCATAAATA 155925 | | | |||||| | || | ||| | || || | ||||||| ||| || | Sbjct 8044 ATTCGTTGGGGCACATGAGAGTCCAGTCACCGTTCTTCTC---AACACGCTTCATGAAGA 7988 Query 155926 CATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGAC-TCCTCATCGCCGTGA 155984 ||| ||| | ||| ||||| | ||| | | | ||| ||||| | |||||| Sbjct 7987 GATCCGGGATCCAGAGAGCGTAGAACAAGTCAC-GGGCACGGACTTCCTCCTTGCCGTGG 7929 Query 155985 TTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCA 156044 ||||||| | || ||||| || | ||||| || |||||| | || || || Sbjct 7928 TTCTTCCTCAAGTCCAAGAACTCGAAGACATCAGCGTGCCATGGCTCAACGTAGATGGCG 7869 Query 156045 AAACTACCA---TTCCTCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACA 156101 || |||| | | ||||||||||| || || || | ||||| || |||||||| Sbjct 7868 AAGGCACCAGGGCGCTTGTTGCCACCCTGGTCAACGTATCTGGCAGTGTTGTTGAAGACG 7809 Query 156102 CCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGAT 156161 | ||||| |||| ||||| || || | || ||||| ||| ||| | | ||| | Sbjct 7808 CGGAGCATGGGAACGATACCGTTCGAGTTTCCGTTGGTACCGGCAATGTATGCACCGGTG 7749 Query 156162 GAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCAT 156221 | || | | ||| || | | ||| ||||| || | || || || || ||| Sbjct 7748 GCACGGATACGATGGATGTTCAATCCGATACCTCCGGCAGTCTTTGAGATCATGGCACAT 7689 Query 156222 TCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCAC 156281 ||| | || | | ||||| |||||| ||| || | ||| | | |||| Sbjct 7688 GTCTTGAGTGTGTCATAGATACCCTCAATACTATCCTCCTTCATGTCGACCAAGAAGCAG 7629 Query 156282 GAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAA 156341 || | |||| ||||||| ||||| ||||| ||||| || | || || | || Sbjct 7628 GATGACAGCTGAGCCTGTGGTGTACCAGCATTGAAGAGTGTTGGGGAGGCGTGTGTGAAG 7569 Query 156342 TACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATA 156401 || || |||||| | ||||||||| | |||||||| || |||||||| Sbjct 7568 TATTTGGAAGACATGAGGTTGTATGTCTCAATGGCCTTCTCAATATCCTCGCCGTGAATG 7509 Query 156402 CAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGC 156461 | | | || | ||| ||| ||||| || | || ||| ||||||| || Sbjct 7508 CCAACCGCCACACGCATAATCATGTGCTGTGGCCTTTCAGCAACGTTGCCATCAAGGCGG 7449 Query 156462 AGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATAATCAAACAGAAAATCACGGTTG 156521 |||||||||| || || || || || || || ||||| | | |||||||||| | Sbjct 7448 AGAAGGTATGAACGCTCAAGGGTCTTGAAGCCAAAATATTGGTAGTTGAAATCACGGTCG 7389 Query 156522 TAA 156524 ||| Sbjct 7388 TAA 7386 >seq1475 Length=37653 Score = 93.3 bits (102), Expect = 1e-13 Identities = 105/140 (75%), Gaps = 3/140 (2%) Strand=Plus/Plus Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872 |||||||| | | ||| || |||||| |||| ||||| || |||| ||||||||| Sbjct 26847 AGAATTTCCTTCAGACGCGGCACACCAAGGGTGACGTTT---TTCGACGACACACCAGCA 26903 Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932 || ||||||||||| || || | || || | |||||||||||| || || |||| Sbjct 26904 AAATGGAAAGTATTGAGCGTCATCTGCGTGGCAGGCTCACCAATAGACTGGGCGGCAAGA 26963 Query 301933 ATACCAACCATTTCTCCTGG 301952 ||||||||||| || || || Sbjct 26964 ATACCAACCATCTCACCAGG 26983 >seq9 Length=21203 Score = 93.3 bits (102), Expect = 1e-13 Identities = 112/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898 || || || ||||||||| ||||| || ||||| |||||||||| ||| || | Sbjct 6941 TGAGCAATCGTCATACGAGAAGGAATGGCGTGGGGGTTGATGATGAGGTCAGGCACAATA 6882 Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAA-TGTTTCCAATAGTTCCCTTTTG 251957 || || ||||| |||||||||| || | || || | ||||| |||||||| || Sbjct 6881 CCCTCGCGGGTGAATGGCATATCCTCTTGG-CGGTAGGTGATACCAATGGTTCCCTTCTG 6823 Query 251958 TCCGTGACGAGAACTGAACTTATCACCAAT 251987 |||||| |||||| ||||||||||||||| Sbjct 6822 TCCGTGGCGAGAAGCGAACTTATCACCAAT 6793 Score = 84.2 bits (92), Expect = 6e-11 Identities = 123/174 (71%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 251484 TGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCG 251543 ||| ||||| |||||||| |||||||| ||||| || |||||||| | |||||||| | Sbjct 7296 TGCGCCGTGGGAAATCATGCAATCACGTTCCATCTCTCCGAAACGCAATCCACCATCTCT 7237 Query 251544 AGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATG 251603 || | |||||| |||| || | || ||| | | || || ||| | | || Sbjct 7236 CGCACGACCCTCCACAGGTTGCCTCGTCAGAATTTGAGTTGGTCCTCTGGCTCTGGCGTG 7177 Query 251604 TTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAA 251657 ||| |||| |||||||| | |||||||||||| ||| ||| || | ||| Sbjct 7176 GATCTTGTCATCGACCATATGTCTCAGACGCTGGTAGTATGTGGGGCCCAAGAA 7123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471750957018958