Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq1566 149 2e-30
seq1475 93.3 1e-13
seq9 93.3 1e-13
>seq1566
Length=8448
Score = 149 bits (164), Expect = 2e-30
Identities = 579/903 (64%), Gaps = 13/903 (1%)
Strand=Plus/Minus
Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689
||| || |||||||| |||||||||||| || |||||| || | |||||||||||
Sbjct 8283 GTACTCGACAATCTCCGTGCACAGGTTAGAGCTGCGGATGGTACCAAGGTTCTTCTGGTT 8224
Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGC 155749
|| | ||| |||||||||||||| | ||| | ||| |||||||||| |||| |
Sbjct 8223 GCTCTTGCGGTTGCAAGCATCCTTGTACAACATGAAAGGGTTTCCTGTCTCAGTCTGAGA 8164
Query 155750 GTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCT-TCCG 155808
|| ||||| ||| || | |||| || || |||| | || | | ||||
Sbjct 8163 CTCGAGAATGGAGTACCAAAGCTTCTGGGCCTTGATAGTCTTG-CGACCCTTCTTCTCCG 8105
Query 155809 ACTCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGC 155868
|||| |||||| || || | | | || ||||||||| || || ||||||||
Sbjct 8104 ACTCGTATTTCTCGTAGAGAGCCTCGAACTCATCACCGTAAACGTCCGCCAATCCAGGGC 8045
Query 155869 ACTTATCGGGGCAAAACAGCGACCA---AATTTTATTACCGATTACACGCTCCATAAATA 155925
| | | |||||| | || | ||| | || || | ||||||| ||| || |
Sbjct 8044 ATTCGTTGGGGCACATGAGAGTCCAGTCACCGTTCTTCTC---AACACGCTTCATGAAGA 7988
Query 155926 CATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGAC-TCCTCATCGCCGTGA 155984
||| ||| | ||| ||||| | ||| | | | ||| ||||| | ||||||
Sbjct 7987 GATCCGGGATCCAGAGAGCGTAGAACAAGTCAC-GGGCACGGACTTCCTCCTTGCCGTGG 7929
Query 155985 TTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCA 156044
||||||| | || ||||| || | ||||| || |||||| | || || ||
Sbjct 7928 TTCTTCCTCAAGTCCAAGAACTCGAAGACATCAGCGTGCCATGGCTCAACGTAGATGGCG 7869
Query 156045 AAACTACCA---TTCCTCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACA 156101
|| |||| | | ||||||||||| || || || | ||||| || ||||||||
Sbjct 7868 AAGGCACCAGGGCGCTTGTTGCCACCCTGGTCAACGTATCTGGCAGTGTTGTTGAAGACG 7809
Query 156102 CCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGAT 156161
| ||||| |||| ||||| || || | || ||||| ||| ||| | | ||| |
Sbjct 7808 CGGAGCATGGGAACGATACCGTTCGAGTTTCCGTTGGTACCGGCAATGTATGCACCGGTG 7749
Query 156162 GAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCAT 156221
| || | | ||| || | | ||| ||||| || | || || || || |||
Sbjct 7748 GCACGGATACGATGGATGTTCAATCCGATACCTCCGGCAGTCTTTGAGATCATGGCACAT 7689
Query 156222 TCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCAC 156281
||| | || | | ||||| |||||| ||| || | ||| | | ||||
Sbjct 7688 GTCTTGAGTGTGTCATAGATACCCTCAATACTATCCTCCTTCATGTCGACCAAGAAGCAG 7629
Query 156282 GAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAA 156341
|| | |||| ||||||| ||||| ||||| ||||| || | || || | ||
Sbjct 7628 GATGACAGCTGAGCCTGTGGTGTACCAGCATTGAAGAGTGTTGGGGAGGCGTGTGTGAAG 7569
Query 156342 TACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATA 156401
|| || |||||| | ||||||||| | |||||||| || ||||||||
Sbjct 7568 TATTTGGAAGACATGAGGTTGTATGTCTCAATGGCCTTCTCAATATCCTCGCCGTGAATG 7509
Query 156402 CAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGC 156461
| | | || | ||| ||| ||||| || | || ||| ||||||| ||
Sbjct 7508 CCAACCGCCACACGCATAATCATGTGCTGTGGCCTTTCAGCAACGTTGCCATCAAGGCGG 7449
Query 156462 AGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATAATCAAACAGAAAATCACGGTTG 156521
|||||||||| || || || || || || || ||||| | | |||||||||| |
Sbjct 7448 AGAAGGTATGAACGCTCAAGGGTCTTGAAGCCAAAATATTGGTAGTTGAAATCACGGTCG 7389
Query 156522 TAA 156524
|||
Sbjct 7388 TAA 7386
>seq1475
Length=37653
Score = 93.3 bits (102), Expect = 1e-13
Identities = 105/140 (75%), Gaps = 3/140 (2%)
Strand=Plus/Plus
Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872
|||||||| | | ||| || |||||| |||| ||||| || |||| |||||||||
Sbjct 26847 AGAATTTCCTTCAGACGCGGCACACCAAGGGTGACGTTT---TTCGACGACACACCAGCA 26903
Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932
|| ||||||||||| || || | || || | |||||||||||| || || ||||
Sbjct 26904 AAATGGAAAGTATTGAGCGTCATCTGCGTGGCAGGCTCACCAATAGACTGGGCGGCAAGA 26963
Query 301933 ATACCAACCATTTCTCCTGG 301952
||||||||||| || || ||
Sbjct 26964 ATACCAACCATCTCACCAGG 26983
>seq9
Length=21203
Score = 93.3 bits (102), Expect = 1e-13
Identities = 112/150 (75%), Gaps = 2/150 (1%)
Strand=Plus/Minus
Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898
|| || || ||||||||| ||||| || ||||| |||||||||| ||| || |
Sbjct 6941 TGAGCAATCGTCATACGAGAAGGAATGGCGTGGGGGTTGATGATGAGGTCAGGCACAATA 6882
Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAA-TGTTTCCAATAGTTCCCTTTTG 251957
|| || ||||| |||||||||| || | || || | ||||| |||||||| ||
Sbjct 6881 CCCTCGCGGGTGAATGGCATATCCTCTTGG-CGGTAGGTGATACCAATGGTTCCCTTCTG 6823
Query 251958 TCCGTGACGAGAACTGAACTTATCACCAAT 251987
|||||| |||||| |||||||||||||||
Sbjct 6822 TCCGTGGCGAGAAGCGAACTTATCACCAAT 6793
Score = 84.2 bits (92), Expect = 6e-11
Identities = 123/174 (71%), Gaps = 0/174 (0%)
Strand=Plus/Minus
Query 251484 TGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCG 251543
||| ||||| |||||||| |||||||| ||||| || |||||||| | |||||||| |
Sbjct 7296 TGCGCCGTGGGAAATCATGCAATCACGTTCCATCTCTCCGAAACGCAATCCACCATCTCT 7237
Query 251544 AGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATG 251603
|| | |||||| |||| || | || ||| | | || || ||| | | ||
Sbjct 7236 CGCACGACCCTCCACAGGTTGCCTCGTCAGAATTTGAGTTGGTCCTCTGGCTCTGGCGTG 7177
Query 251604 TTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAA 251657
||| |||| |||||||| | |||||||||||| ||| ||| || | |||
Sbjct 7176 GATCTTGTCATCGACCATATGTCTCAGACGCTGGTAGTATGTGGGGCCCAAGAA 7123
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471750957018958
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |