Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq2445 127 2e-23
seq872 122 1e-21
seq309 118 1e-20
seq1566 113 6e-19
>seq2445
Length=7783
Score = 127 bits (140), Expect = 2e-23
Identities = 204/287 (71%), Gaps = 7/287 (2%)
Strand=Plus/Minus
Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238
||| || ||||| ||| | |||||| || | ||||| | |||||| || |||||
Sbjct 544 ACCCTCATCGCGGGAGATGAGCTCGTTGGAGAAAGTCAGGCCAGCCATGAGACCACGCTT 485
Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298
||||||||| || || | | ||| ||| ||||| ||||| ||||| ||||| || ||
Sbjct 484 CTTGAGCCAGAAAATAGAGGCGAACGAGCCGGAGAAGAAGATACCCTCAACGGCAGCGAA 425
Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCT-CCTTGTTGATCCACTTCATCGCCC 869357
| | | || |||| |||||||||| || || | |||| ||||||| | | ||||
Sbjct 424 GGCAACCAGGCGCTGGGCAAAGGTG--GAATCCTTGTCTTG--GATCCACCTGACAGCCC 369
Query 869358 AGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGT-GGTCCTTT 869416
|||||||||| ||| | | | || | || |||||||| ||||||| || |
Sbjct 368 AGTCGGCCTTCTTCTTGATGCAAGGGATGGTCTCGATGGCATTGAAGAGGTATGTGC-GC 310
Query 869417 TCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463
| |||| | ||||||| || |||||||| ||||| || || |||||
Sbjct 309 TGGGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTCTC 263
Score = 123 bits (136), Expect = 3e-22
Identities = 167/233 (72%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 868699 GTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCAT 868758
||| ||| | || ||| |||||| ||||||||||| || | || ||||| ||||||
Sbjct 850 GTAGTCGGCGACACGCTTCTCGAAGAAGTTGGTCTTTCCTGCCAGGGAGATGTTCTCCAT 791
Query 868759 CCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCG 868818
| || ||||||| | ||||||| ||| ||| ||||| || ||||| |
Sbjct 790 GAAGTCAAAGGGGTTGGTAGACTTGTAGAACTTCTCGTTACCGAGGGAAAGCAGCAGCCT 731
Query 868819 GTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCAC 868878
||||||||| || |||||||| || ||| | | |||||||||||||| |||||
Sbjct 730 GTCGGCGACGAATTCGATGTATTGCTTCATCAAGTTGGCGTTCATGCCGAGCAGCGCACA 671
Query 868879 CGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATGA 868931
|| || | ||| ||| ||||||| ||||||| |||| |||||| |||||
Sbjct 670 TGGGAGTGCCTCTGTCAAGAACTCTTGCTCGATCGCGACAGCCTCGGTGATGA 618
Score = 105 bits (116), Expect = 8e-17
Identities = 174/249 (70%), Gaps = 3/249 (1%)
Strand=Plus/Minus
Query 869635 GTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGGAC 869694
||| ||||||||||| ||| ||||| ||||| ||| | |||||| | ||||||
Sbjct 259 GTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAGCGAGCCTCTGGGATTTGGAC 200
Query 869695 CTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAAAA 869754
||| | |||| || || ||||||||| || || ||||| |||||||| ||
Sbjct 199 CTCACTGCTGAAGCGCTCGAGAAGGTTCTCGTTGACAATTCCGTCAGACGCGGCGAAGAA 140
Query 869755 AGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAG-CG--ACACCCAGTGGAC 869811
||| || ||||| ||| |||| |||||| ||||| |||| || ||||| |
Sbjct 139 AGCGAGAACGTGGGAGATGAAGTAGCGCTCATCGTCATTGAGACGGTTGTTCCAGTCGTG 80
Query 869812 GGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTA 869871
||| | |||||| | |||||| || ||||||| || || || ||||| |||||
Sbjct 79 AAGGTCCTTGGAGAGGTCAATCTCCTCTGCAGTCCAGAAAGACGCTTCCGCCTTCTTGTA 20
Query 869872 CATCTCCCA 869880
||||| |||
Sbjct 19 CATCTGCCA 11
>seq872
Length=14839
Score = 122 bits (134), Expect = 1e-21
Identities = 275/409 (67%), Gaps = 12/409 (3%)
Strand=Plus/Minus
Query 18096 CTTTGGCGAGTCGCACGGGGCGGGCG-TCGGCTGCATCATCGACGGCGTGCCGCCGTGCA 18154
|| |||||||||||| | || || | || |||||| |||| ||| || || | |
Sbjct 8454 CTATGGCGAGTCGCATTGT-CGCTCGGTGGGATGCATCGTCGATGGCTGCCCCCCAGGAA 8396
Query 18155 TGCCACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCG 18214
|| || |||| ||||| |||||||||||| || || |||||||| || ||| |||
Sbjct 8395 TGGAGCTCACCGAAGCCGATATCCAGCCTCAGATGACCCGCCGCCGACCAGGTCAGAGCG 8336
Query 18215 CACTTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGAACG 18274
| || | ||||| ||| ||||| || | ||| ||||| || ||||| ||| ||
Sbjct 8335 CCCTGACGACGCCCCGCGACGAGAAGGACCAAGTCGAAATCCACTCCGGCACCGAGTTCG 8276
Query 18275 GCCTCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCG 18334
|| | ||||| ||| | || ||||| | | || ||||| |||||||| ||| |
Sbjct 8275 GCGTTACGCTGGGCACCCCGATCGGCATGCTCGTCCGCAACCAGGACCAGCGCCCCAAGG 8216
Query 18335 ACTATTCCGACA-TGTGCAAGG-------TGCCGCGGCCCTCACACGCCGACTACACCTA 18386
| || | || | | | | | | | || || || || || ||||||| || ||
Sbjct 8215 ATTA--CGGAAACTCTACCATGGATCTCTTCCCTCGCCCATCGCATGCCGACTGGACATA 8158
Query 18387 CATGGCCAAGTACGGCATCAAGGCGTCGTCGGGCGGAGGCCGGTCGTCTGCCCGCGAGAC 18446
| | | ||||||||| ||||||| |||||||| || || || |||||||||||
Sbjct 8157 CCTCGAGAAGTACGGCGTCAAGGCCAGCTCGGGCGGCGGGCGCAGCTCCGCCCGCGAGAC 8098
Query 18447 CCTCATGCGCGTCGCCGCCGGCGCGGTCGCCGAGAAATGGCTCGGTCTC 18495
| | | || || || || ||| | || ||||||| || |||||
Sbjct 8097 CATTGGAAGAGTGGCGGCGGGTGCGATTGCGGAGAAATACCTGCGTCTC 8049
Score = 104 bits (114), Expect = 3e-16
Identities = 118/157 (75%), Gaps = 1/157 (1%)
Strand=Plus/Minus
Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106
||||||||||| ||||| || || || || ||||| || ||||||||||||
Sbjct 7826 GACAGCATCGGTGGCACTGTCACCTGTGTCATCAAGAACGTCCCCAGTGGCCTCGGCGAG 7767
Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166
|| ||||| |||||||| || ||| |||||||||||||||||| ||||| ||||||
Sbjct 7766 CCCTGCTTCGACAAGATGGAAGCCATGCTCGCCCACGCCATGCTCAGCATCCCCGCCACC 7707
Query 19167 AAGGGATTCGAGATTGGCAGCGGGTT-TGCGGGTGCG 19202
||||| || ||| | || ||| || |||| ||||
Sbjct 7706 AAGGGCTTTGAGGTCGGATCCGGCTTCGGCGGTTGCG 7670
>seq309
Length=11340
Score = 118 bits (130), Expect = 1e-20
Identities = 125/162 (77%), Gaps = 2/162 (1%)
Strand=Plus/Minus
Query 1592132 TGGGACAAGGAGTTT-TGCGACGTCGAGCAGCCCACCCTCTTTGAGTTGATCCTCGCCGC 1592190
|||||| || |||| ||| | ||||| || | || || ||| | ||||| || |
Sbjct 9243 TGGGACCAGAAGTTCATGC-AGGTCGACCAAGAGATGCTGTTCGAGATCATCCTGGCATC 9185
Query 1592191 CAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAACATGAT 1592250
||||||||| ||||||||||| ||||||||| | || |||||| | ||||| || |||||
Sbjct 9184 CAACTACCTGGACATCAAGCCGCTGCTCGATGTCGGATGCAAGACGGTGGCGAATATGAT 9125
Query 1592251 CAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACAT 1592292
||||| ||||| || ||||||||| | ||||| ||||| ||
Sbjct 9124 TAAGGGAAAGTCTCCGGAGGAGATCAGGAAGACGTTTAATAT 9083
>seq1566
Length=8448
Score = 113 bits (124), Expect = 6e-19
Identities = 182/259 (70%), Gaps = 2/259 (1%)
Strand=Plus/Minus
Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124
|||||| ||||| | || |||| ||| ||||||||||||||||| |||| ||||| ||
Sbjct 7842 CTGGTCAACGTATCTGGCAGTGTTGTTGAAGACGCGGAGCATGGGAACGATACCGTTCGA 7783
Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184
| |||||||| || || | ||| || |||| ||| || | || | || ||
Sbjct 7782 GTTTCCGTTGGTACCGGCAATGTATGCACCGGTGGCACGGATACGATGGATGTTCAATCC 7723
Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGT-TTGAGCGTGTCGTAGATGCCCT 1630243
||| || ||||| | ||| ||||| | || || ||| ||||| ||||| ||||| ||||
Sbjct 7722 GATACCTCCGGCAGTCTTTGAGATCATGGCACA-TGTCTTGAGTGTGTCATAGATACCCT 7664
Query 1630244 CGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGC 1630303
| || || |||||||||| || | ||||| || || || | || | || |
Sbjct 7663 CAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGATGACAGCTGAGCCTGTGGTGTAC 7604
Query 1630304 CGGCGTTGAAGAGCGTGGG 1630322
| || |||||||| || ||
Sbjct 7603 CAGCATTGAAGAGTGTTGG 7585
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6106849183410278
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |