Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq1054 122 8e-23
seq2493 96.9 3e-15
>seq1054
Length=16682
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | || || || || || || || || ||||| || || ||| | ||
Sbjct 1716 ATGCAGATTTTCGTCAAGACCCTTACGGGGAAGACGATCACGCTTGAGGTGGAATCATCC 1657
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | ||||| ||||| ||||| || || || || ||||| || ||
Sbjct 1656 GATACCATTGACAACGTAAAGTCGAAGATTCAAGATAAGGAGGGTATTCCTCCGGACCAG 1597
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || |||||||||| || || |||||||||||| | | | |||| ||||| |||
Sbjct 1596 CAGCGCCTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGCACCTTGTCCGATTACAAC 1537
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||| ||||| || || || || |||||| |||| |||| || ||
Sbjct 1536 ATTCAGAAGGAGTCCACCCTGCATTTGGTGCTGCGTCTGCGTGGTGG 1490
Score = 96.9 bits (106), Expect = 3e-15
Identities = 107/143 (75%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847
|||||||||||||| || ||||| || || || || |||||| ||||||| ||||| ||
Sbjct 2088 AAGATCCAAGACAAGGAGGGAATCCCCCCGGACCAGCAACGTCTGATCTTCGCCGGAAAG 2029
Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907
|| || ||||| | | | | || || || ||||| || ||||| ||||| || |||
Sbjct 2028 CAACTTGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTTCAC 1969
Query 24908 TTGGTGTTGCGATTGCGCGGAGG 24930
||||| |||| |||| || ||
Sbjct 1968 TTGGTCCTGCGTCTGCGTGGTGG 1946
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| ||| | || || | || || || || ||||| ||||| || || | |
Sbjct 1260 ATGCAGATTTTTGTCAAGACCTTGACTGGAAAGACCATTACTCTCGAGGTTGAGTCTTCT 1201
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| || || || || || || || || ||
Sbjct 1200 GACACCATTGACAACGTCAAGTCGAAGATCCAGGATAAGGAGGGTATCCCACCGGACCAG 1141
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || |||||||||||||||| ||||| |||||| ||| | || || || |||
Sbjct 1140 CAGCGCCTGATCTTTGCCGGGAAGCAGCTCGAGGATGGGAGGACGCTGAGCGACTACAAC 1081
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || ||||| || || ||||||||| | || | || || |||
Sbjct 1080 ATCCAGAAGGAGAGCACTCTTCACTTGGTGCTCCGTCTTCGTGGTGGC 1033
>seq2493
Length=2855
Score = 96.9 bits (106), Expect = 3e-15
Identities = 239/361 (66%), Gaps = 4/361 (1%)
Strand=Plus/Minus
Query 138358 ATCTCCCACACGGTCTTGTATAGATCACGAATATGTCGC--GGTATTGTTGCAATATTTT 138415
|||||||| || |||||||| ||| | || |||| || || | | ||| ||||
Sbjct 638 ATCTCCCAGACAGTCTTGTAGAGAGCCTTGAT--GTCGGCTGGGATGTTGGGAATGTTTT 581
Query 138416 GAATGCTCCCGTTGGCCGCAATGATGCGATTTCTCATGTCATCGTTGTACAGATTCAACT 138475
| ||| || | |||| |||||||| || |||||| || |||| || |
Sbjct 580 GGATGGATCCTCCGTCCGCGATGATGCGGTTCTTCATGTTGTCAGACCACAGTCCCATGT 521
Query 138476 TGATCAAGTCGTTTATCAGATATCTGTTTATGACCTGAAATTCACCGGCCAATACTCGAC 138535
|| |||||| || | || | || | ||||| || || || |||| || || |
Sbjct 520 CGACCAAGTCCTTGAGCAACCAAGGATTGACAACCTGGAACTCGCCAGCCAGGACACGGC 461
Query 138536 GAACGTAAATGTTGTTGGTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCG 138595
| ||| ||||| |||| | ||||| || | |||||| || |||||||| | |
Sbjct 460 GCGAGTAGATGTTCGAGGTGTATGGCTCGAAGCACTCGTTGAAGCCGAGAATCTGGGAGG 401
Query 138596 TGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTC 138655
||| || || |||||| || || | ||| || || || | |||||| |||||||
Sbjct 400 TGGAAGCAGTGGGCATGGGTGCAACGAGAAGGGAGTTGCGGACACCGTGCTGCTTGATCT 341
Query 138656 GTTCCTTGAGCGACGACCAGTCCCACAAATCGCTAGGTTTTTTGTTCCACATATCGTACT 138715
| ||||||| || ||||||||||| ||| |||| | | |||||||||||| |
Sbjct 340 GGACCTTGAGAGAGTCCCAGTCCCACAGGTCGGTAGGGGTGACGCCCCACATATCGTATT 281
Query 138716 G 138716
|
Sbjct 280 G 280
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449877725773520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |