Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq2445 149 1e-29
seq309 113 7e-19
seq1566 91.5 2e-12
seq1344 87.8 3e-11
>seq2445
Length=7783
Score = 149 bits (164), Expect = 1e-29
Identities = 211/292 (72%), Gaps = 5/292 (2%)
Strand=Plus/Minus
Query 794377 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAA 794436
||||| | |||||| || |||||||||||||| || || | ||| ||| |||||
Sbjct 507 AGGCCAGCCATGAGACCACGCTTCTTGAGCCAGAAAATAGAGGCGAACGAGCCGGAGAAG 448
Query 794437 AAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCT 794496
||||| ||||| ||||| || ||| | || || |||| |||||| ||| | || | |
Sbjct 447 AAGATACCCTCAACGGCAGCGAAGGCAACCAGGCGCTGGGCAAAGGTGG--AATCCTTGT 390
Query 794497 TTGTTGATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATG 794556
| | ||||||| | | ||||| || ||||| ||| | | | || | || ||||||
Sbjct 389 CT-TGGATCCACCTGACAGCCCAGTCGGCCTTCTTCTTGATGCAAGGGATGGTCTCGATG 331
Query 794557 GCGCGAAAGAGGTG-GTCCTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGA 794615
|| ||||||| || | || | || | ||||||| ||| |||||||||||||| ||
Sbjct 330 GCATTGAAGAGGTATGTGCG-CTGGGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGA 272
Query 794616 GTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAGCAG 794667
||| ||||| | ||| ||||| ||||| ||| ||||| || || ||||||
Sbjct 271 GTATGTCTCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAG 220
Score = 125 bits (138), Expect = 1e-22
Identities = 169/233 (73%), Gaps = 2/233 (1%)
Strand=Plus/Minus
Query 793908 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 793967
|| ||| | || ||| |||||| ||||||||||| || | || ||||| ||||||
Sbjct 849 TAGTCGGCGACACGCTTCTCGAAGAAGTTGGTCTTTCCTGCCAGGGAGATGTTCTCCATG 790
Query 793968 CACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGG 794027
| || ||||||| | | |||| ||||||| ||||| || ||||| | |
Sbjct 789 AAGTCAAAGGGGTTGGTAGACTTGTAGAACTTCTCGTTACCGAGGGAAAGCAGCAGCCTG 730
Query 794028 TCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGC-CAC 794086
|||||||||||||| ||||| || ||| | | |||||||||||||| ||||| ||
Sbjct 729 TCGGCGACGAATTCGATGTATTGCTTCATCAAGTTGGCGTTCATGCCGAGCAGCGCACAT 670
Query 794087 GGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGA 794139
||| || | ||| | | ||||||| ||||||| |||| |||||| ||||||
Sbjct 669 GGG-AGTGCCTCTGTCAAGAACTCTTGCTCGATCGCGACAGCCTCGGTGATGA 618
>seq309
Length=11340
Score = 113 bits (124), Expect = 7e-19
Identities = 110/142 (77%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 2035612 AGGTCGACCAACCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGC 2035671
||||||||||| | || || ||| | ||||| || |||||||||| ||||||||||
Sbjct 9224 AGGTCGACCAAGAGATGCTGTTCGAGATCATCCTGGCATCCAACTACCTGGACATCAAGC 9165
Query 2035672 CCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGG 2035731
| || |||||| | || |||||||| ||||| || | || ||||| ||||| || ||||
Sbjct 9164 CGCTGCTCGATGTCGGATGCAAGACGGTGGCGAATATGATTAAGGGAAAGTCTCCGGAGG 9105
Query 2035732 ACATCCGCAAGACCTTTAACAT 2035753
| ||| | ||||| ||||| ||
Sbjct 9104 AGATCAGGAAGACGTTTAATAT 9083
>seq1566
Length=8448
Score = 91.5 bits (100), Expect = 2e-12
Identities = 175/258 (68%), Gaps = 0/258 (0%)
Strand=Plus/Minus
Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599
|||||| || || | || |||| ||| ||||||||||||||||| || | ||||| ||
Sbjct 7842 CTGGTCAACGTATCTGGCAGTGTTGTTGAAGACGCGGAGCATGGGAACGATACCGTTCGA 7783
Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659
| |||||||| || || | ||| || || | ||| || | || | || ||
Sbjct 7782 GTTTCCGTTGGTACCGGCAATGTATGCACCGGTGGCACGGATACGATGGATGTTCAATCC 7723
Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719
||| || ||||| | ||| ||||| | || || | || || || || ||||| |||||
Sbjct 7722 GATACCTCCGGCAGTCTTTGAGATCATGGCACATGTCTTGAGTGTGTCATAGATACCCTC 7663
Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779
|| || |||||||||| | || ||||| || || || | | | || ||
Sbjct 7662 AATACTATCCTCCTTCATGTCGACCAAGAAGCAGGATGACAGCTGAGCCTGTGGTGTACC 7603
Query 2073780 GGCATTGAAGAGCGTGGG 2073797
||||||||||| || ||
Sbjct 7602 AGCATTGAAGAGTGTTGG 7585
>seq1344
Length=13974
Score = 87.8 bits (96), Expect = 3e-11
Identities = 161/236 (68%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 2019204 GGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAG 2019263
|| ||||| ||| | |||| ||||| ||||||||| || | || || | ||||| ||
Sbjct 5758 GGACGCCAAAAGCTTGTCATTCTCGACGAGGCCGACAGCATGACATCCGGTGCCCAACAA 5699
Query 2019264 GCCCTCCGATCGACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAAC 2019323
|||||||| || ||||| | ||| | || || || ||||| | || ||||||
Sbjct 5698 GCCCTCCGCCGCACTATGGAGATATACTCGTCGACCACCCGCTTTGCATTTGCGTGCAAC 5639
Query 2019324 ACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTTGCGCGC 2019383
||| | | | ||||| |||| || | || ||||||||||||| ||| |
Sbjct 5638 CAGTCCAACAAGATAATCGAGCCCCTGCAATCGAGATGTGCCATCTTGCGCTATGCAAGG 5579
Query 2019384 CTCACCGACGCCCAGATCGCCGCGCGTCTGCGCGAGATTATCGACGCCGAAAAGGT 2019439
|| || || || || ||| |||||| | | |||||||||| || || |||||
Sbjct 5578 CTAACAGATGCACAAGTCGTGAAGCGTCTTCTCCAGATTATCGAGGCAGAGAAGGT 5523
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7915870472301426
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |