Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq335 145 5e-30
seq1054 122 6e-23
>seq335
Length=36749
Score = 145 bits (160), Expect = 5e-30
Identities = 166/221 (75%), Gaps = 8/221 (4%)
Strand=Plus/Minus
Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822
|||| ||||| ||||| |||| ||||||||| ||||| |||||||| ||| |||| ||
Sbjct 30416 CTCAAGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCA 30357
Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882
|| || || ||||| |||||||||||||| || |||||||| | || | |||||||||
Sbjct 30356 TCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTG 30297
Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGT 34938
|| | || || ||||| || | ||||| || | ||| || |||| |||
Sbjct 30296 TCCTGGATCTTGGACTTGAC--AT--TGTCGATAGTGTCGGACGACTCCACCTCAAGGGT 30241
Query 34939 TATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGA 34979
|| ||||| ||||| |||||||| || ||||| |||||||
Sbjct 30240 GATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCATGA 30200
>seq1054
Length=16682
Score = 122 bits (134), Expect = 6e-23
Identities = 144/193 (75%), Gaps = 8/193 (4%)
Strand=Plus/Plus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
|||||||| ||||| ||| ||||||||| ||||| ||||| || ||| |||| | ||
Sbjct 1960 CAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTC 2019
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| ||||||||||||||||||||||| ||||||||||| | || | |||||||||||
Sbjct 2020 CTCAAGTTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGGATTCCCTCCTTGTC 2079
Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTA 34940
| || || || || || | ||||| || || |||||| |||| ||| |
Sbjct 2080 TTGGATCTTGCTCTTAAC--AT--TGTCGATGGTATCGGAGGACTCGACCTCAAGGGTGA 2135
Query 34941 TGGTCTTTCCCGT 34953
||||||| || ||
Sbjct 2136 TGGTCTTGCCAGT 2148
Score = 113 bits (124), Expect = 3e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| ||||| |||||||||||||| ||||| ||||| || | | | ||||
Sbjct 1049 AGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTCCCATCC 1108
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| ||||| |||||||| || |||||||| | || | |||||||| ||
Sbjct 1109 TCGAGCTGCTTCCCGGCAAAGATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATCC 1168
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | ||| | ||| || || | || ||||||
Sbjct 1169 TGGATCTTCGACTTGACGTTGTCAATGGTGTCAGAAGACTCAACCTCGAGAGTAATGGTC 1228
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||| || | |||||| ||||| ||||||||
Sbjct 1229 TTTCCAGTCAAGGTCTTGACAAAAATCTGCAT 1260
Score = 105 bits (116), Expect = 4e-18
Identities = 154/218 (71%), Gaps = 10/218 (5%)
Strand=Plus/Plus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| |||| || | |||| ||||||||||||||| || || || | | |||| ||||
Sbjct 1504 CAGCACCAAATGCAGGGTGGACTCCTTCTGAATGTTGTAATCGGACAAGGTGCGGCCATC 1563
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
||||| ||||| || || |||||||| || |||||||| | || | |||||||| ||
Sbjct 1564 CTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTATC 1623
Query 34885 GTTTATTTTTTGTTTGACG-----GATGCTATCGATTCATTGGCCTCGACATCAACGGTT 34939
| || || || ||| ||| ||||| | || || || |||| ||
Sbjct 1624 TTGAATCTTCGACTTTACGTTGTCAATGGTATCGGATGAT-----TCCACCTCAAGCGTG 1678
Query 34940 ATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| ||||| ||||| |||||||| || || ||||||||
Sbjct 1679 ATCGTCTTCCCCGTAAGGGTCTTGACGAAAATCTGCAT 1716
Score = 100 bits (110), Expect = 2e-16
Identities = 141/196 (72%), Gaps = 8/196 (4%)
Strand=Plus/Plus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||||||||||||||| ||||| || || |||| |||| |||| |||||||| |||||
Sbjct 1753 CTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGACCATCCTCCAACTGCTTTCCTGCGAA 1812
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
||||| || |||||||| | || | |||||||| || | || || || || |
Sbjct 1813 AATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTATCCTGAATCTTCGACTTCAC--A 1870
Query 34906 TGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCT 34961
| | ||||| || | |||||| || | || |||||||| || || |||||||
Sbjct 1871 T--TGTCGATGGTGTCGGACGACTCGACCTCCAAAGTGATGGTCTTGCCAGTCAGGGTCT 1928
Query 34962 TTACAAAGATCTGCAT 34977
| || || ||||||||
Sbjct 1929 TGACGAAAATCTGCAT 1944
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325678772207546
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |