Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters Query= NC_023423.1 Length=610033 Score E Sequences producing significant alignments: (Bits) Value seq9 87.8 7e-12 >seq9 Length=21203 Score = 87.8 bits (96), Expect = 7e-12 Identities = 120/163 (74%), Gaps = 5/163 (3%) Strand=Plus/Minus Query 309684 CTCCATCAACTTGGCGATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTC 309743 ||| ||||| | || || |||||||||||||||||||| | |||||||||| | ||| Sbjct 6951 CTCAATCAAATGAGCAATCGTCATACGAGAAGGAATGGCGTGGGGGTTGATGATGAGGTC 6892 Query 309744 AGGTCTCATTCCGGTGATTGGGTTGAAAGGCATATCTTCTT-CAGGTACAATCAAACCAA 309802 ||| | || | | | || |||| |||||||| |||| |||| | | ||||| Sbjct 6891 AGG-CACAATACCCT--CGCGGGTGAATGGCATATCCTCTTGGCGGTA-GGTGATACCAA 6836 Query 309803 TAGTTCCCTTTTGAGCGTGCCTGGAAGCAAACTTGTCACCAAT 309845 | |||||||| || |||| | ||||| ||||| |||||||| Sbjct 6835 TGGTTCCCTTCTGTCCGTGGCGAGAAGCGAACTTATCACCAAT 6793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1951886015819152