Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq335 122 8e-23
seq1054 116 4e-21
>seq335
Length=36749
Score = 122 bits (134), Expect = 8e-23
Identities = 155/211 (73%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
|| || | ||||||||| ||||| || ||||| || | ||| | | | ||||||||
Sbjct 30407 AAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCA-TCCTCGAG 30349
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||||||||| ||| | || || ||||||||||| || || || || |||||||| |||
Sbjct 30348 CTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGAT 30289
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| ||||| | || | ||||||| | |||||| || | ||||| || |||||
Sbjct 30288 CTTGGACTTGACATTGTCGATAGTGTCGGACGACTCCACCTCAAGGGTGATAGTCTTGCC 30229
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATGGCT 133664
||||| || || ||||| || |||||| ||
Sbjct 30228 CGTCAGGGTCTTCACGAAGATTTGCATGACT 30198
>seq1054
Length=16682
Score = 116 bits (128), Expect = 4e-21
Identities = 146/198 (74%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| ||||| ||||| || ||||| ||| || ||| ||| | ||||| | |||||| ||
Sbjct 1748 GTCGACTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGACCA-TCCTCCAACTGCTTTCC 1806
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| |||| || ||||||||||| ||||| ||||| ||||| || ||||| |||
Sbjct 1807 TGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTATCCTGAATCTTCGACTT 1866
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | || | ||||||| | ||| || || | |||| ||| ||||| ||||| ||
Sbjct 1867 CACATTGTCGATGGTGTCGGACGACTCGACCTCCAAAGTGATGGTCTTGCCAGTCAGGGT 1926
Query 133643 TTTTACGAAAATCTGCAT 133660
|| ||||||||||||||
Sbjct 1927 CTTGACGAAAATCTGCAT 1944
Score = 114 bits (126), Expect = 1e-20
Identities = 150/206 (73%), Gaps = 4/206 (2%)
Strand=Plus/Plus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGC 133514
||||| |||||||| ||||| || |||||||| || || ||| ||||||||||
Sbjct 1285 ATGTAATGTGGACTCCTTCTGGATGTTGTAATCAGACAAAGT--ACGGCCGTCCTCGAGC 1342
Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574
|||||||||||| |||| || ||||||||||| || |||||||| ||||| || |||
Sbjct 1343 TGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCTTGAATC 1402
Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634
|| ||||| | || | || || | | ||| || || | || | || || |||
Sbjct 1403 TTGGACTTGACGTTATCGATGGTATCCGACGACTCGACTTCCAGCGTAATTGTCTTTCCG 1462
Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660
|| ||||| || ||||| || |||||
Sbjct 1463 GTGAGAGTCTTGACGAAGATTTGCAT 1488
Score = 105 bits (116), Expect = 6e-18
Identities = 149/207 (72%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
||||| | ||||||||| ||||| || ||||||||| || ||| | | | ||||| ||
Sbjct 1511 AAATGCAGGGTGGACTCCTTCTGAATGTTGTAATCGGACAAGGTGCGGCCA-TCCTCCAG 1569
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
|||||| || || | || || ||||||||||| ||||| || || ||||| || ||
Sbjct 1570 CTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTATCTTGAAT 1629
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| ||| | | |||| || |||| | ||||| || | |||| || || ||
Sbjct 1630 CTTCGACTTTACGTTGTCAATGGTATCGGATGATTCCACCTCAAGCGTGATCGTCTTCCC 1689
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
|| || || || ||||||||||||||
Sbjct 1690 CGTAAGGGTCTTGACGAAAATCTGCAT 1716
Score = 104 bits (114), Expect = 2e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCCGCGTA 133528
||| ||||| || ||||| |||| || ||| | |||||||||||||| || || |
Sbjct 1069 CTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTCCCATCCTCGAGCTGCTTCCCGGCAAA 1128
Query 133529 AATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTG 133588
|| || ||||||||||| || ||||| || ||||| || |||||| ||||| |
Sbjct 1129 GATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTGGATCTTCGACTTGACGTT 1188
Query 133589 CTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTAC 133648
|||| ||||| | | ||| || |||| || | ||| || || |||| || || ||
Sbjct 1189 GTCAATGGTGTCAGAAGACTCAACCTCGAGAGTAATGGTCTTTCCAGTCAAGGTCTTGAC 1248
Query 133649 GAAAATCTGCAT 133660
|||||||||||
Sbjct 1249 AAAAATCTGCAT 1260
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483399444886160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |