Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq1054 120 2e-22 >seq1054 Length=16682 Score = 120 bits (132), Expect = 2e-22 Identities = 166/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | || ||| | ||||||||| || ||| ||| || || |||||||||||||| Sbjct 1489 ACCACCACGCAGACGCAGCACCAAATGCAGGGTGGACTCCTTCTGAATGTTGTAATCGGA 1548 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | ||||| | || |||| || || || ||||| |||| |||||||| || | || Sbjct 1549 CAAGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGG 1608 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||| || || || ||| ||| | | || | ||| | ||| ||| |||||||| Sbjct 1609 AATACCCTCCTTATCTTGAATCTTC-GACTTTACGTTGTCAATGGTATCGGATGATTCCA 1667 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | |||| ||||||||| || || || | || || || || ||||||||| Sbjct 1668 CCTCAAGCGTGATCGTCTTCCCCGTAAGGGTCTTGACGAAAATCTGCATA 1717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328689842513280