Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq1054 105 2e-17
seq335 96.9 8e-15
>seq1054
Length=16682
Score = 105 bits (116), Expect = 2e-17
Identities = 144/201 (72%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || || || || || || ||||||||||| || || || |||
Sbjct 1941 CAGATTTTCGTCAAGACCCTGACTGGCAAGACCATCACTTTGGAGGTCGAGTCGTCCGAC 1882
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| |||||||| || || || || ||| |||||| ||
Sbjct 1881 ACCATCGACAATGTGAAGTCGAAGATTCAGGATAAGGAGGGCATTCCTCCGGACCAGCAG 1822
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || || ||||| |||||||||||||| ||||| | ||| || |||| |||||| |
Sbjct 1821 CGCCTGATTTTCGCAGGAAAGCAGTTGGAGGATGGTCGCACTCTGTCCGACTACAACATT 1762
Query 206353 CAGAAAGAGTCTACTCTTCAC 206373
||||| ||||| ||||| |||
Sbjct 1761 CAGAAGGAGTCGACTCTCCAC 1741
Score = 95.1 bits (104), Expect = 3e-14
Identities = 141/200 (71%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || || || || || |||||||| | || |||||| || ||
Sbjct 1713 CAGATTTTCGTCAAGACCCTTACGGGGAAGACGATCACGCTTGAGGTGGAATCATCCGAT 1654
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || |||||| ||||||||||| || || || ||| |||||| ||
Sbjct 1653 ACCATTGACAACGTAAAGTCGAAGATTCAAGATAAGGAGGGTATTCCTCCGGACCAGCAG 1594
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || ||||| || || |||||| |||| ||||| | || ||| ||||||||||| |
Sbjct 1593 CGCCTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGCACCTTGTCCGATTACAACATT 1534
Query 206353 CAGAAAGAGTCTACTCTTCA 206372
||||| ||||| || || ||
Sbjct 1533 CAGAAGGAGTCCACCCTGCA 1514
Score = 87.8 bits (96), Expect = 4e-12
Identities = 137/196 (70%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
||| || ||||| ||||| || || || ||||||| || || || || ||||
Sbjct 1474 CAAGACTCTCACCGGAAAGACAATTACGCTGGAAGTCGAGTCGTCGGATACCATCGATAA 1415
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||| ||||||||||| || || || || |||||| || | || || ||
Sbjct 1414 CGTCAAGTCCAAGATTCAAGATAAGGAGGGCATCCCACCGGACCAGCAGCGCCTGATTTT 1355
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
||| || |||||| | || || || | |||||| | ||||||||| ||||||| |||||
Sbjct 1354 CGCGGGCAAGCAGCTCGAGGACGGCCGTACTTTGTCTGATTACAACATCCAGAAGGAGTC 1295
Query 206364 TACTCTTCACCTTGTT 206379
|| | || ||||||
Sbjct 1294 CACATTACATCTTGTT 1279
>seq335
Length=36749
Score = 96.9 bits (106), Expect = 8e-15
Identities = 145/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || || || || ||||| | || ||||| || ||||| ||||
Sbjct 30217 AAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTCCGACACTATCGACAAT 30276
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| || || || || |||||| |||||| || | || ||||||
Sbjct 30277 GTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAGCAGCGCCTGATCTTC 30336
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
||||| |||||| | || ||||| | || | | || |||||| ||||||| |||||
Sbjct 30337 GCCGGCAAGCAGCTCGAGGATGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCC 30396
Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390
|| |||||| | || |||||||||||
Sbjct 30397 ACCCTTCACTTGGTCTTGAGACTTCG 30422
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181767287892814
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |