Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq2445 208 1e-47
seq1566 111 2e-18
>seq2445
Length=7783
Score = 208 bits (230), Expect = 1e-47
Identities = 358/507 (71%), Gaps = 12/507 (2%)
Strand=Plus/Plus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||| ||| | |||||| || ||||| || || || || ||||| || |||||| | ||||
Sbjct 7 GATCTGGCAGATGTAC-AAGAAGGCGGAAGCGTCTTTCTGGACTGCAGAGGAGATTGACC 65
Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGT--CG-CTGAGCGACGACGAGCGCCATTTCATCA 1455891
|| | ||| | ||||| || || | ||||| |||||| | ||||||
Sbjct 66 TCTCCAAGGACCTTCACGACTGGAACAACCGTCTCAATGACGATGAGCGCTACTTCATCT 125
Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951
||||| ||||| ||| |||||||| || || || || ||||||||| ||
Sbjct 126 CCCACGTTCTCGC-TTTCTTCGCCGCGTCTGACGGAATTGTCAACGAGAACCTTCTCGAG 184
Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011
||||| | | ||||||||| | |||||||| || | || ||||| ||||| |||
Sbjct 185 CGCTTCAGCAGTGAGGTCCAAATCCCAGAGGCTCGCTGCTTCTACGGTTTCCAAATCATG 244
Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071
||||| ||||| ||| | || || ||||| ||||| |||||||| ||| ||||||| | |
Sbjct 245 ATCGAGAACATTCACGCCGAGACATACTCCCTCCTCATCGACACATACATCAAGGAGCAG 304
Query 1456072 GTCGAGAAGGACC-ACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGC 1456130
| | || | || ||||||| |||||||| || | || | | | ||| |||||
Sbjct 305 GCCCAGC-GCACATACCTCTTCAATGCCATCGAGACCATCCCTTGCATCAAGAAGAAGGC 363
Query 1456131 CGACTGGGCGATGAAGTGGATCAACAAG-GAGGGCCTCGACACTTTGCCGAGCGGCTCGT 1456189
||||||||| | | ||||||| |||| | || || || ||||||| |||| || ||
Sbjct 364 CGACTGGGCTGTCAGGTGGATC--CAAGACAAGGATTCCAC-CTTTGCCCAGCGCCTGGT 420
Query 1456190 CGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCT 1456248
| ||| || | ||| ||||| ||||| ||||| ||| ||| | | || || |||||
Sbjct 421 TGCCTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGCTCGTTCGCCTCTATTTTCTGGCT 480
Query 1456249 CAAGAAGCGCGGCCTCATGCCCGGTCT 1456275
||||||||| || |||||| | || ||
Sbjct 481 CAAGAAGCGTGGTCTCATGGCTGGCCT 507
Score = 89.7 bits (98), Expect = 7e-12
Identities = 153/218 (70%), Gaps = 3/218 (1%)
Strand=Plus/Plus
Query 1456524 TCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCGC 1456583
||||| |||||| |||| ||||||| ||||||| | | ||| | || || ||||
Sbjct 618 TCATCACCGAGGCTGTCGCGATCGAGCAAGAGTTCTTGACAGAGGCACTCCCATGTGCGC 677
Query 1456584 TCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCCT 1456643
| ||||||||||||||| | | ||| || ||||| ||| || ||||||||| | ||
Sbjct 678 TGCTCGGCATGAACGCCAAC-TTGATGAAGCAATACATCGAA-TTCGTCGCCGACAGGCT 735
Query 1456644 GCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATGG 1456703
||| | ||||| | |||||| |||| | | ||||||| || | ||||
Sbjct 736 GCTGCTTTCCCTCGG-TAACGAGAAGTTCTACAAGTCTACCAACCCCTTTGACTTCATGG 794
Query 1456704 AGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAG 1456741
|| ||||| || | || ||||||||||| ||||||
Sbjct 795 AGAACATCTCCCTGGCAGGAAAGACCAACTTCTTCGAG 832
>seq1566
Length=8448
Score = 111 bits (122), Expect = 2e-18
Identities = 183/262 (70%), Gaps = 8/262 (3%)
Strand=Plus/Plus
Query 259925 CCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGAC 259984
|| || ||||| ||||| || || || | | ||| || || ||||| || | |||
Sbjct 7585 CCAACACTCTTCAATGCTGGTACACCACAGGCTCAGCTGTCATCCTGCTTCTTGGTCGAC 7644
Query 259985 ATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCC 260044
||||||| ||| || ||||| ||||||||||| |||||| || || | |||||
Sbjct 7645 ATGAAGGAGGATAGTATTGAGGGTATCTATGACACACTCAAGACATGTGCCATGATCTCA 7704
Query 260045 AAGGCGGCCGGCGGCATCGGTTTTGCCGCACA--CAAGG--TGCGCGCCGCGGGCGCCTA 260100
||| | ||||| || ||||| || | ||| || | | || ||| | || || ||
Sbjct 7705 AAGACTGCCGGAGGTATCGGATT----GAACATCCATCGTATCCGTGCCACCGGTGCATA 7760
Query 260101 CGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGA 260160
| | || || |||||||| | || ||||| | || |||||||| ||||| || ||| |
Sbjct 7761 CATTGCCGGTACCAACGGAAACTCGAACGGTATCGTTCCCATGCTCCGCGTCTTCAACAA 7820
Query 260161 CACGGCGCGCTACGTCGACCAG 260182
||| || | ||||| ||||||
Sbjct 7821 CACTGCCAGATACGTTGACCAG 7842
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177470339204508
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |