Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq1054 152 5e-32
seq335 122 8e-23
>seq1054
Length=16682
Score = 152 bits (168), Expect = 5e-32
Identities = 172/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | || ||||||||| | || |||||| |||||||||||||||| |
Sbjct 1490 CCACCACGCAGACGCAGCACCAAATGCAGGGTGGACTCCTTCTGAATGTTGTAATCGGAC 1549
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
||||| || | || |||||||||||||| ||||| |||| ||||||||||||| ||||
Sbjct 1550 AAGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGA 1609
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688
| | |||||| || ||||| ||| | |||| | | || ||| ||||||||
Sbjct 1610 ATACCCTCCTTATCTTGAATCTTCGACTTTA-CGTTGTCAATGGTATCGGATGATTCCAC 1668
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||| | ||||||||| || ||||| | || || || || ||||||||
Sbjct 1669 CTCAAGCGTGATCGTCTTCCCCGTAAGGGTCTTGACGAAAATCTGCAT 1716
Score = 125 bits (138), Expect = 6e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | | |||||| || | || |||||| ||||||||||| |||| |
Sbjct 1718 CCACCACGAAGACGAAGCACCAAGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAC 1777
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || || | || |||| |||||| || || || |||| ||||||||||||| ||||
Sbjct 1778 AGAGTGCGACCATCCTCCAACTGCTTTCCTGCGAAAATCAGGCGCTGCTGGTCCGGAGGA 1837
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| || |||||| ||| ||||| ||||| | | | | |||||| ||| || |||
Sbjct 1838 ATGCCCTCCTTATCCTGAATCTTCGACTTCACATTGTCGATGGTGTCGGACGACTCGACC 1897
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|||| ||||| || || || |||| || || || || ||||||||
Sbjct 1898 TCCAAAGTGATGGTCTTGCCAGTCAGGGTCTTGACGAAAATCTGCAT 1944
Score = 107 bits (118), Expect = 2e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | | |||||| || | || |||||||| || |||||||| ||| |
Sbjct 1034 CCACCACGAAGACGGAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 1093
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || | | | || || |||||||| || ||||| |||| ||||||||||||| ||
Sbjct 1094 AGCGTCCTCCCATCCTCGAGCTGCTTCCCGGCAAAGATCAGGCGCTGCTGGTCCGGTGGG 1153
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688
| | |||||| ||| |||||| ||| | |||| | | ||||| || || ||
Sbjct 1154 ATACCCTCCTTATCCTGGATCTTCGACTTGA-CGTTGTCAATGGTGTCAGAAGACTCAAC 1212
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||| | || || || || || ||||| || || ||||| ||||||||
Sbjct 1213 CTCGAGAGTAATGGTCTTTCCAGTCAAGGTCTTGACAAAAATCTGCAT 1260
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | | || | |||||| || |||||| || ||||||||||| | |
Sbjct 1262 CCACCACGGAGGCGGAGAACAAGATGTAATGTGGACTCCTTCTGGATGTTGTAATCAGAC 1321
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
|| || || |||| || |||||||| ||||| || |||| ||||||||||||| ||
Sbjct 1322 AAAGTACGGCCGTCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGG 1381
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| || |||||| || ||||| ||| | | | | || || ||| || ||
Sbjct 1382 ATGCCCTCCTTATCTTGAATCTTGGACTTGACGTTATCGATGGTATCCGACGACTCGACT 1441
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|||| ||| || || || || || | ||| || || || || |||||
Sbjct 1442 TCCAGCGTAATTGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 1488
>seq335
Length=36749
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|| ||||| | ||||| ||||| || | || |||||| || |||||||| || |
Sbjct 30428 CCTCCACGAAGTCTCAAGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAA 30369
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| ||| || | || || |||||||| || || || |||| ||||||||||||| |||
Sbjct 30368 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGA 30309
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| | |||||||||| |||||| ||| | | | | | |||||| ||| ||||||
Sbjct 30308 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCCACC 30249
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| | ||||| || || ||||||| || ||||| || || |||||
Sbjct 30248 TCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 30202
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450773686192720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |