Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq335 122 9e-23
seq1054 114 1e-20
>seq335
Length=36749
Score = 122 bits (134), Expect = 9e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
||||| | |||| ||| || | ||| || ||||| ||||| || ||||||||||| |
Sbjct 30428 CCTCCACGAAGTCTCAAGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAA 30369
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | || |||||||| ||||| || || |||| |||||||| || || ||
Sbjct 30368 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGA 30309
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| || || || || || || || ||||| ||| | ||||||||||| |||||
Sbjct 30308 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCCACC 30249
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || || || || || || | || || ||||| ||||||||
Sbjct 30248 TCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 30202
>seq1054
Length=16682
Score = 114 bits (126), Expect = 1e-20
Identities = 156/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| || | ||| | ||| || || || ||||| ||||||||||||||| | ||| ||
Sbjct 1727 AGACGAAGCACCAAGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGA 1786
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| || | ||| || ||||| ||||||| |||||||| || || || ||||| ||
Sbjct 1787 CCATCCTCCAACTGCTTTCCTGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCC 1846
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || ||||| || || || ||| | ||||||||||| || || || | |||
Sbjct 1847 TTATCCTGAATCTTCGACTTCACATTGTCGATGGTGTCGGACGACTCGACCTCCAAAGTG 1906
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| || || || | || || |||||||| |||||
Sbjct 1907 ATGGTCTTGCCAGTCAGGGTCTTGACGAAAATCTGCAT 1944
Score = 109 bits (120), Expect = 6e-19
Identities = 155/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| |||| ||| | || || ||||| ||||| ||||||||||| ||| | |||| |
Sbjct 1499 AGACGCAGCACCAAATGCAGGGTGGACTCCTTCTGAATGTTGTAATCGGACAAGGTGCGG 1558
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| || ||||| || || ||||| |||| |||||||| || || || || || ||
Sbjct 1559 CCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCC 1618
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| |||||||| || || || ||| | || ||||| |||||||| || || ||
Sbjct 1619 TTATCTTGAATCTTCGACTTTACGTTGTCAATGGTATCGGATGATTCCACCTCAAGCGTG 1678
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || || || | || || |||||||| |||||
Sbjct 1679 ATCGTCTTCCCCGTAAGGGTCTTGACGAAAATCTGCAT 1716
Score = 104 bits (114), Expect = 2e-17
Identities = 156/219 (71%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC-CAACGGTGTG 134554
|| || | ||| | ||| || ||| ||||| || ||||||||||||| || || |
Sbjct 1043 AGACGGAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTC 1102
Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614
| || |||||||| || || ||||| |||| |||||||| || || || || || ||
Sbjct 1103 CCA-TCCTCGAGCTGCTTCCCGGCAAAGATCAGGCGCTGCTGGTCCGGTGGGATACCCTC 1161
Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674
|| || || || || ||||| ||| | ||||| || || || || ||||||||
Sbjct 1162 CTTATCCTGGATCTTCGACTTGACGTTGTCAATGGTGTCAGAAGACTCAACCTCGAGAGT 1221
Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|||||| || || || || || || || ||||| |||||
Sbjct 1222 AATGGTCTTTCCAGTCAAGGTCTTGACAAAAATCTGCAT 1260
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505376074025680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |