Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq1566 205 1e-47
seq2445 109 8e-19
>seq1566
Length=8448
Score = 205 bits (226), Expect = 1e-47
Identities = 523/785 (67%), Gaps = 16/785 (2%)
Strand=Plus/Minus
Query 69351 GATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAA 69410
||| || || || || | ||| || ||||| ||| || || |||||||| | || ||
Sbjct 8247 GATGGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTACAACATGAA 8188
Query 69411 CGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTAT 69470
|| | || || ||| ||||||| |||| ||| || | ||||| | || || ||
Sbjct 8187 AGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATGGAGTACCAAAGCTTCTGGGCCTTGAT 8128
Query 69471 TACGGTCTTGTAACGCTTCTCTTTT---TCATATTGT--GTATATAGCCGTTCGAATTCA 69525
|||||| || ||||| | || |||| ||| | |||| ||||| |||
Sbjct 8127 A---GTCTTGCGACCCTTCTTCTCCGACTCGTATTTCTCGTAGAGAGCC--TCGAACTCA 8073
Query 69526 TCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCA 69585
|| || |||| || |||||||||| ||||| || || ||||| | | ||| || |
Sbjct 8072 TCACCGTAAACGTCCGCCAATCCAGGGCATTCGTTGGGGCACATGAGAGTCCAGTCACCG 8013
Query 69586 TCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGC-TATAAAGAGATCTCT 69644
| | || ||| || ||||| || ||||| || ||||| ||||| || || || || |
Sbjct 8012 TTCTTCTCAACACGCTTCATGAAGAGATCCGGGATCCAGAGAGCGTAGAACAAG-TCACG 7954
Query 69645 GGTTCTATTTTCTTCATTTCC-TGTAttttttttAAGATCGAGAAACTCCATAATATCAG 69703
|| | ||| || || || || | || | ||| | |||| ||| | | |||||
Sbjct 7953 GGCACGGACTTCCTCCTTGCCGTGGTTCTTCCTCAAGTCCAAGAA-CTCGAAGACATCAG 7895
Query 69704 AATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTA 69763
|||||||| || | || || || | | | || || || || || || ||||| || |
Sbjct 7894 CGTGCCATGGCTCAACGTAGATGGCGAAGGCACCAGGGCGCTTGTTGCCACCCTGGTCAA 7835
Query 69764 TGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCAT 69823
||||||||||||||| || |||| | ||||| |||| ||||| || || || || |
Sbjct 7834 CGTATCTGGCAGTGTTGTTGAAGACGCGGAGCATGGGAACGATACCGTTCGAGTTTCCGT 7775
Query 69824 TTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTC 69883
| || || | ||| || || | || || ||| | || | || || ||||
Sbjct 7774 TGGTACCGGCAATGTATGCACCGGTGGCACGGATACGATGGATGTTCAATCCGATACCTC 7715
Query 69884 CTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTAT 69943
| || | || ||||| | ||||| || | ||||||||| |||||||| || ||||
Sbjct 7714 CGGCAGTCTTTGAGATCATGGCACATGTCTTGAGTGTGTCATAGATACCCTCAATACTAT 7655
Query 69944 CATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAA 70003
| || |||||| | | || ||| |||| ||| ||| || || ||||| |
Sbjct 7654 CCTCCTTCATGTCGACCAAGAAGCAGGATGACAGCTGAGCCTGTGGTGTACCAGCATTGA 7595
Query 70004 ATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAG 70063
| | ||| || || ||||| ||||| |||| ||| | || |||||||| ||||| |
Sbjct 7594 AGAGTGTTGGGGAGGCGTGTGTGAAGTATTTGGAAGACATGAGGTTGTATGTCTCAATGG 7535
Query 70064 CTGATTCTATATCC-CACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGT 70122
| || |||||| | | | ||||| || | ||| |||||||| | ||| ||||| ||
Sbjct 7534 CCTTCTCAATATCCTCGCCG-TGAATGCCAACCGCCACACGCATAATCATGTGCTGTGGC 7476
Query 70123 CGTTC 70127
| |||
Sbjct 7475 CTTTC 7471
>seq2445
Length=7783
Score = 109 bits (120), Expect = 8e-19
Identities = 174/249 (70%), Gaps = 3/249 (1%)
Strand=Plus/Minus
Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675
||||||||||||| || || |||||||| | || | ||||| || || || ||
Sbjct 565 GCAGGCGAAGTCAGTGTGGAGACCCTCATCGCGGGAGATGAGCTCGTTGGAGAAAGTCAG 506
Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735
|||| ||| ||||||||||| |||||||| || || | || || || || || |||||
Sbjct 505 GCCAGCCATGAGACCACGCTTCTTGAGCCAGAAAATAGAGGCGAACGAGCCGGAGAAGAA 446
Query 39736 GATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATT---ATG 39792
||| || || || || || || ||||| || | || | | | | ||| || ||
Sbjct 445 GATACCCTCAACGGCAGCGAAGGCAACCAGGCGCTGGGCAAAGGTGGAATCCTTGTCTTG 386
Query 39793 TATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATT 39852
|||||| | ||||| || || |||||||| | ||||| || || || || |||||
Sbjct 385 GATCCACCTGACAGCCCAGTCGGCCTTCTTCTTGATGCAAGGGATGGTCTCGATGGCATT 326
Query 39853 AAAGAGATA 39861
||||| ||
Sbjct 325 GAAGAGGTA 317
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686878455803760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |