Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq1566 192 7e-44 seq2493 159 4e-34 seq2445 149 8e-31 >seq1566 Length=8448 Score = 192 bits (212), Expect = 7e-44 Identities = 619/946 (65%), Gaps = 31/946 (3%) Strand=Plus/Minus Query 118695 ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTG 118754 || ||| | || ||||| | || |||| |||||||| | |||||| | ||| | Sbjct 8342 ACGTACGTTGGCAGGGCAAGGGATGCCAAGTTACACACGGCAACCTCATCTGGAGCAGAG 8283 Query 118755 TACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTT 118814 ||||| | ||| |||||||||| ||| || || ||||| || | |||||| || || Sbjct 8282 TACTCGACAATCTCCGTGCACAGGTTAGAGCTGCGGATGGTACCAAGGTTCTTCTGGTTG 8223 Query 118815 GACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGAC 118874 ||| ||| || ||||||||||| | |||| | || | || ||||| || || ||| Sbjct 8222 CTCTTGCGGTTGCAAGCATCCTTGTACAACATGAAAGGGTTTCCTGTCTCAGTCTGAGAC 8163 Query 118875 TTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCG-CCCCTCTT 118932 | |||||| | | ||| | | || | || | | ||| ||| || ||| |||| Sbjct 8162 TCGAGAATGGAGTACCAAAGCTTCTGGGCCTTG-ATAGT---CTTG---CGACCCTTCTT 8110 Query 118933 C-----CTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCC 118987 | |||||| || |||||| || || ||||| ||||| | || | | || Sbjct 8109 CTCCGACTCGTATTTCTCGTAGAGAGCCTCGAACTCATCACCGTAAACGTCCGCCAATCC 8050 Query 118988 TGGTGCCTT-ATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGA 119046 || || || | ||||| | ||||| ||| | ||| || |||||| |||||||||| Sbjct 8049 AGG-GCATTCGTTGGGGCACATGAGAGTCCAGTCACCGTTCTTCTCAACACGCTTCATGA 7991 Query 119047 AGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCT 119106 |||| || ||||||||||| || |||| | || || || |||| || | || | Sbjct 7990 AGAGATCCGGGATCCAGAGAGCGTAGAACAAGTCACGGGCACGGACTTCCTCCTTGCCGT 7931 Query 119107 GATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCG 119166 | || | ||| ||||| || || | || ||| |||||||| || || | ||| | | Sbjct 7930 GGTTCTTCCTCAAGTCCAAGAACTCGAAGACATCAGCGTGCCATGGCTCAACGTAGATGG 7871 Query 119167 CGATTGACCCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAA 119220 ||| | || | | || ||| |||||| || || || |||||| ||| | Sbjct 7870 CGAAGGCACC---AGGGCGCTTGTTGCCACCCTGGTCAACGTATCTGGCAGTGTTGTTGA 7814 Query 119221 ATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACT 119280 | || || ||||| |||| |||||| | || | || || || || ||| | Sbjct 7813 AGACGCGGAGCATGGGAACGATACCGTTCGAGTTTCCGTTGGTACCGGCAATGTATGCAC 7754 Query 119281 TATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCG 119340 |||| | || | ||||||| || || ||||| || || ||||||||| | Sbjct 7753 CGGTGGCACGGATACGATGGATGTTCAATCCGATACCTCCGGCAGTCTTTGAGATCATGG 7694 Query 119341 CGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGA 119400 | || | |||| || | ||||| || || || || |||| | ||| | || Sbjct 7693 CACATGTCTTGAGTGTGTCATAGATACCCTCAATACTATCCTCCTTCATGTCGACCAAGA 7634 Query 119401 AGCAGCTCGACATTTGAGGCCTG-GGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGG 119459 ||||| |||| ||| ||||| ||||||||||| |||||||| ||||| | ||||| Sbjct 7633 AGCAGGATGACAGCTGA-GCCTGTGGTGTACCAGCATTGAAGAGTGTTGGGGAGGCGTGT 7575 Query 119460 ATGAACATACCTTGG--GACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCC 119517 |||| || |||| ||||| || ||| ||||| | | | ||| || || | Sbjct 7574 GTGAA-GTA-TTTGGAAGACATGAGGTTGTATGTCTCAATGGCCTTCTCAATATCCTCGC 7517 Query 119518 CGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCAT 119577 ||||||| || | || || ||||||| ||||| || || |||| | | | |||| Sbjct 7516 CGTGAATGCCAACCGCCACACGCATAATCATGTGCTGTGGCCTTTCAGCAACGTTGCCAT 7457 Query 119578 CGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAAATA 119623 | || | | ||||| ||| | |||||||| |||||||| Sbjct 7456 CAAGGCGGAGAAGGTATGAACGCTCAAGGGTCTTGAAGCCAAAATA 7411 >seq2493 Length=2855 Score = 159 bits (176), Expect = 4e-34 Identities = 474/724 (65%), Gaps = 24/724 (3%) Strand=Plus/Minus Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896 ||||| |||||||| || |||||||| || |||||||| || | ||||| |||| Sbjct 800 CGGAGATAGTACATGCCGGTCTTGAGGCCGAGCTTCCAGCCAGCAAAGTGCATGGAGGTG 741 Query 117897 AACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 117956 | |||| | ||||| | |||| || ||| | ||||| |||||||||||| Sbjct 740 ATCTTGCCCATTGTTGGGTCCTTCATGTGGATGTTGAGGGACTGGGACTGATCGATGAAG 681 Query 117957 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTT---GATTTCCCACACAGTC 118013 || ||||| || ||||| | | | | | | || ||| ||||| |||||| Sbjct 680 GCACCACGATCAGCGGCCATCTGGACGA--TGGTGCG-CTGAGAGATCTCCCAGACAGTC 624 Query 118014 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCC 118073 ||||||| ||| || || ||||||| | || |||||||||||||| || || Sbjct 623 TTGTAGAGAGCCTTGATGTCGGCTGGGATGTTGGGAATGTTTTGGATGGATCCTCCGTCC 564 Query 118074 TTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCT----C 118129 || ||| | | |||||| | | ||||| || || || | | |||| | Sbjct 563 GCGATGATGCGGTTCTTCATGTTGTCAGACCACAGTCCCATGTCGACCAAGTCCTTGAGC 504 Query 118130 CACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATT 118189 || | | | ||||||||| ||||| || || ||| || | | ||||| || Sbjct 503 AACCA-AGG---ATTGACAACCTGGAACTCGCCAGCCAGGACACGGCGCGAGTAGATGTT 448 Query 118190 GGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGG 118249 | ||||||||||| |||||||| ||| || | || |||| ||||| || ||||| Sbjct 447 CGAGGTGTATGGCTCGAAGCACTCGTTGAAGCCGAGAATCTGGGAGGTGGAAGCAGTGGG 388 Query 118250 CATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGC 118309 ||||||||| | ||||||| ||| |||| ||| | | | | || | ||||||||| Sbjct 387 CATGGGTGCAACGAGAAGGGAGTTGCGGACACCGTGCTGCTTGATCTGGACCTTGAGAGA 328 Query 118310 GTCCCAGTCGTA---GTTG--AGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATA 118364 ||||||||| | || | || || | || ||||||||| | ||||| Sbjct 327 GTCCCAGTCCCACAGGTCGGTAGGGGTGACGCC-----CCACATATCGTATTGGAGCTCG 273 Query 118365 CCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCG 118424 || | |||| |||| |||||||| | ||||| |||| ||| | || || |||| || Sbjct 272 CCCTTGGACACTGGAGATCCCTCGTAGGTCTCGTATGTGCCGTGAATCTGGGCCAGCTCA 213 Query 118425 GAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTG 118484 | ||| | || |||| || || || ||||| || | | || | ||| Sbjct 212 ACGGACGCAGTCAAAGCGCCGTGGTAAATGGTCTCAAAGATCTGGGAGTTGAGGTGCTTA 153 Query 118485 GCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACA 118544 |||||| |||||| || | || ||| | ||| |||| || ||||| |||||| Sbjct 152 GCCTCGGGGGAATCGAAGGGCAGGCGGAGGGCCAAGAATGCATCAGCAAGACCCTGGACA 93 Query 118545 CCGA 118548 |||| Sbjct 92 CCGA 89 >seq2445 Length=7783 Score = 149 bits (164), Expect = 8e-31 Identities = 344/510 (67%), Gaps = 9/510 (2%) Strand=Plus/Minus Query 130027 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 130086 |||||||||||| || ||||||||||| || || ||||| ||| || | ||||||||| Sbjct 550 GTGGAGACCCTCATCGCGGGAGATGAGCTCGTTGGAGAAAGTCAGGCCAGCCATGAGACC 491 Query 130087 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 130146 |||||||| | ||||||||| | || ||||| ||||||||||| ||||| || Sbjct 490 ACGCTTCTTGAGCCAGAAAATAGAGGCGAACGAGCCGGAGAAGAAGATACCCTCAACGGC 431 Query 130147 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGT-ATCAAACCACTTCATCG 130205 ||||| |||| || |||| ||||||| | | | |||| | | |||| | | | Sbjct 430 AGCGAAGGCAACCAGGCGCTGGGCAAAGGTG-GAATCCTTGTCTTGGATCCACCTGACAG 372 Query 130206 CCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCT 130265 |||| | ||||| |||| ||| || |||| ||||| ||| || | ||||| | | Sbjct 371 CCCAGTCGGCCTTCTTCTTGATGCAAGGGATGGTCTCGATGGCATTGAAGAGGTATGTGC 312 Query 130266 TTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCATGGACCA 130325 | | | || |||||||| | || ||||| || ||||| ||| | || | Sbjct 311 GCTGGGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTCTCGGCGTGAATGT 252 Query 130326 TTTC-ATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCT 130384 | || || ||| || || ||||||| |||| || || || || |||||| || Sbjct 251 TCTCGATCATGATTTGGAAAC-CGTAGAAGCAGCGAGCCTCTGGGATTTGGACCTCA-CT 194 Query 130385 GCAAAATTGTTATTG-ATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAG 130443 || || | | | | ||||| |||||||| || ||| | || || || || || Sbjct 193 GCTGAAGCGCTCGAGAAGGTTCTCGTTGACAATTCCGTCAGACGCGGCGAAGAAAGCGAG 134 Query 130444 GATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCAAGATC 130500 | | ||||| | | |||| || || | || | |||||||||| ||| || Sbjct 133 AACGTGGGAGATGAAGTAGCGCTCATCGTCATTGAGACGGTTGTTCCAGTCGTGAAGGTC 74 Query 130501 CTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530 ||| ||||| || | |||||| |||||||| Sbjct 73 CTTGGAGAGGTCAATCTCCTCTGCAGTCCA 44 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618407880625040