Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq1566 219 5e-52
seq2493 123 3e-23
seq2445 123 3e-23
>seq1566
Length=8448
Score = 219 bits (242), Expect = 5e-52
Identities = 624/946 (66%), Gaps = 25/946 (3%)
Strand=Plus/Plus
Query 104156 TATTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCAACGGCTCGATGGTGTC-TTGAT 104214
|||||||| |||| ||||||||| || |||| || || ||||| | ||| |
Sbjct 7411 TATTTTGGCTTCAAGACCCTTGAGCGTTCATACCTTCTCCGCCTTGATGGCAACGTTGCT 7470
Query 104215 GGAAACCCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGA 104274
| ||| |||||| ||||| | ||||| ||||| | || ||||| || || || |||||
Sbjct 7471 G-AAAGGCCACAGCACATGATTATGCGTGTGGCGGTTGGCATTCACGGCGAGGATATTGA 7529
Query 104275 TTCTGTCTTGGAGACATACGACAAGATGTC--CCAAGGTATGTTCATTCACGCAACACCA 104332
| | | ||||||||| || ||||| |||| || |||| ||||| | |||
Sbjct 7530 GAAGGCCATTGAGACATACAACCTCATGTCTTCCAAA-TAC-TTCACACACGCCTCCCCA 7587
Query 104333 ACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAAC 104392
|| ||||||||||||||||||||| | || |||| |||||| | ||| ||
Sbjct 7588 ACACTCTTCAATGCTGGTACACCACAGGCTCAGCTGTCATCCTGCTTCTTGGTCGACATG 7647
Query 104393 AAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAG 104452
|||||||| || | |||||||||| || || | | ||||| |||||||||
Sbjct 7648 AAGGAGGATAGTATTGAGGGTATCTATGACACACTCAAGACATGTGCCATGATCTCAAAG 7707
Query 104453 TGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGG 104512
|| || ||||| || || |||||||| | | | |||| | |||
Sbjct 7708 ACTGCCGGAGGTATCGGATTGAACATCCATCGTATCCGTGCCACCGGTGCATACATTGCC 7767
Query 104513 GGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 104572
|| || || || | || | ||||| |||| ||||| ||||| || ||| ||| ||
Sbjct 7768 GGTACCAACGGAAACTCGAACGGTATCGTTCCCATGCTCCGCGTCTTCAACAACACTGCC 7827
Query 104573 CGCTATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCC 104628
| || || | || | ||| | | | | || | |||| |||| |||||||
Sbjct 7828 AGATACGTTGACCAGGGTGG-CAACAAGCGCCCTGGTGCCTTCGCCATCTACGTTGAGCC 7886
Query 104629 ATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGC 104688
||||||||| ||| || | |||||| | || ||| | ||||| || | ||||| |
Sbjct 7887 ATGGCACGCTGATGTCTTCGAGTTCTTGGACTTGAGGAAGAACCACGGCAAGGAGGAAGT 7946
Query 104689 GCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGA 104748
|| ||| || | |||| |||||||||||| || ||||||||||||||| | |||||
Sbjct 7947 CCGTGCCCGTGACTTGTTCTACGCTCTCTGGATCCCGGATCTCTTCATGAAGCGTGTTGA 8006
Query 104749 GGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCTGGTCTCTCCGATGCCG 104807
| ||| || | ||| ||||| | || || || || || ||||| | | || |
Sbjct 8007 GAAGAACGGTGACTGGACTCTCATGTGCCCCAACGAATGC-CCTGGATTGGCGGACGTTT 8065
Query 104808 TGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAG-----GAAGAA-GGTCGGGCGA 104861
||||| ||||| || || || ||| || |||||| |||||| ||||| ||
Sbjct 8066 ACGGTGATGAGTTCGAGGCTCTCTACGAGAAATACGAGTCGGAGAAGAAGGGTCGCAAGA 8125
Query 104862 CTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTG 104921
|| | || |||| || | ||| | | |||||| ||||||| || ||||| |
Sbjct 8126 CTATCAAGG-CCCAGAAGC-----TTTGGTACTCCATTCTCGAGTCTCAGACTGAGACAG 8179
Query 104922 GTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGG 104981
| | || | |||| | ||||| || || || |||| ||||| || || ||||| | |
Sbjct 8180 GAAACCCTTTCATGTTGTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTTG 8239
Query 104982 GTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGA 105041
|| ||| || || || || || || || || | || | | | |||||||
Sbjct 8240 GTACCATCCGCAGCTCTAACCTGTGCACGGAGATTGTCGAGTACTCTGCTCCAGATGAGG 8299
Query 105042 CGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGA 105087
|| ||||||||| | ||||| | || || || | ||| || ||
Sbjct 8300 TTGCCGTGTGTAACTTGGCATCCCTTGCCCTGCCAACGTACGTTGA 8345
>seq2493
Length=2855
Score = 123 bits (136), Expect = 3e-23
Identities = 269/392 (69%), Gaps = 18/392 (5%)
Strand=Plus/Plus
Query 105215 CACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTC----G 105270
||| | ||| ||| | ||||||| |||||||| || |||| ||||||| | | |
Sbjct 73 CACAGACCAGTTGCTGTCGGTGTCCAGGGTCTTGCTGATG----CATTCTTGGCCCTCCG 128
Query 105271 CCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTA 105330
|| | || |||||| ||| || ||| | |||| | | || ||||||||||| ||
Sbjct 129 CCTGCCCTTCGATTCCCCCGAGGCTAAGCACCTCAACTCCCAGATCTTTGAGACCATTTA 188
Query 105331 TCACGCCGCTCTTGA-GGCG--AGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAAC 105387
|||| |||| |||| ||| ||| ||| |||| || || | || |||| || ||
Sbjct 189 CCACGGCGCT-TTGACTGCGTCCGTT--GAGCTGGCCCAGATTCACGGCACATACGAGAC 245
Query 105388 CTTTGAGGGTTCTCCAGCTTCACAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGAGA 105446
|| ||||| ||||||| || |||||| | ||| |||| |||||||||| || |
Sbjct 246 CTACGAGGGATCTCCAGTGTC-CAAGGGCGAGCTCCAATACGATATGTGGG-GCGTCACC 303
Query 105447 CCAAGC-TTCACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGT 105505
|| | | | | |||||||| ||||||||| | |||||| || | ||| | ||
Sbjct 304 CCTACCGACCTGTGGGACTGGGACTCTCTCAAGGTCCAGATCAAGCAGCACGGTGTCCGC 363
Query 105506 AACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAAT 105565
||| || ||| | || || ||||| || || |||||| | || || | || ||
Sbjct 364 AACTCCCTTCTCGTTGCACCCATGCCCACTGCTTCCACCTCCCAGATTCTCGGCTTCAAC 423
Query 105566 GAATGCTTTGAACCCTACACGACGAACATCTA 105597
|| ||||| || || ||||| ||||||||||
Sbjct 424 GAGTGCTTCGAGCCATACACCTCGAACATCTA 455
>seq2445
Length=7783
Score = 123 bits (136), Expect = 3e-23
Identities = 168/232 (72%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 94714 CTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 94773
||||| | |||||| | || | || || || | ||||| || || |||||| | | |
Sbjct 320 CTCTTCAATGCCATCGAGACCATCCCTTGCATCAAGAAGAAGGCCGACTGGGCTGTCAGG 379
Query 94774 TGGTTTGAT-ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGA 94832
||| | | |||| | | ||||||| |||| || | || || || |||||
Sbjct 380 TGGATCCAAGACAAGGATTCCA-CCTTTGCCCAGCGCCTGGTTGCCTTCGCTGCCGTTGA 438
Query 94833 GGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCAT 94892
||||||||||||||| || || ||| | |||||| |||||||||||||| ||||||||
Sbjct 439 GGGTATCTTCTTCTCCGGCTCGTTCGCCTCTATTTTCTGGCTCAAGAAGCGTGGTCTCAT 498
Query 94893 GCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944
| | || || |||||||||||||| ||||| || || ||||| ||||||
Sbjct 499 GGCTGGCCTGACTTTCTCCAACGAGCTCATCTCCCGCGATGAGGGTCTCCAC 550
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583235034454160
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