Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq1566 300 2e-76 seq2445 178 1e-39 seq2493 172 6e-38 >seq1566 Length=8448 Score = 300 bits (332), Expect = 2e-76 Identities = 592/865 (68%), Gaps = 23/865 (3%) Strand=Plus/Minus Query 79049 GGCACAGCGATGCCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTT 79108 |||| || ||||||| ||| |||||||| ||| || || ||| ||||| || | Sbjct 8328 GGCA-AGGGATGCCAAGTTACACACGGCAACCTCATCTGGAGCAGAGTACTCGACAATCT 8270 Query 79109 CTGTGCACAAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTAC 79168 | ||||||| ||||| |||||| || | |||||||||||||||||| ||| | Sbjct 8269 CCGTGCACAGGTTAGAGCTGCGGATGGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTTGC 8210 Query 79169 AGGCGTCCTTGTAGCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGT 79228 | || |||||||| ||||| | || | || |||||| |||| || ||||| | || Sbjct 8209 AAGCATCCTTGTACAACATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATGGAGT 8150 Query 79229 CCCAGATGTCCCGGGCCCGGACAACCTTCTTGTACCGACCCTG----TGCGAC--GTACG 79282 ||| | | | ||||| || | ||||| ||||||| | |||| ||| Sbjct 8149 ACCAAAGCTTCTGGGCCTTGATAG---TCTTG---CGACCCTTCTTCTCCGACTCGTATT 8096 Query 79283 TCCGGTACAACTCGTTGAAAGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCG 79342 || ||| | | | ||| | || || || || || | || || ||||| |||| | Sbjct 8095 TCTCGTAGAGAGCCTCGAACTCATCACCGTAAACGTCCGCCAATCCAGGGCATTCGTTGG 8036 Query 79343 GGCACATCAGGTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCC 79402 ||||||| || |||||| ||| ||||||||| || ||||||||| |||||||||| Sbjct 8035 GGCACATGAGAGTCCAGTCACCGTTCTTCTCAACACGCTTCATGAAGAGATCCGGGATCC 7976 Query 79403 ACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCT 79462 | || || ||| | ||| ||| ||| | ||||| | ||| |||||| | || | Sbjct 7975 AGAGAGCGTAGAACAAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTCCTCAAGT 7916 Query 79463 CGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGC 79522 | | || || | || || |||||||| ||||| | ||||||||||| | ||| || Sbjct 7915 CCAAGAACTCGAAGACATCAGCGTGCCATGGCTCAACGTAGATGGCGAAGGCACCAGGGC 7856 Query 79523 GCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCA 79582 ||||| ||| ||||||| ||||| | ||| ||||||||||| || ||||||||||| | Sbjct 7855 GCTTGTTGCCACCCTGGTCAACGTATCTGGCAGTGTTGTTGAAGACGCGGAGCATGGGAA 7796 Query 79583 CGATGCCGTCGGCGACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCG 79642 |||| |||| | | ||||| || ||| || || |||| | || || | | || Sbjct 7795 CGATACCGTTCGAGTTTCCGTTGGTACCGGCAATGTATGCACCGGTGGCACGGA--TACG 7738 Query 79643 A--GCAGTGGATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGT 79700 | | || | |||||| || |||| ||| ||||| || || |||||| || Sbjct 7737 ATGGATGTTCAATCCGATACCTCCGGCAGTCTTTGAGATCATGGCACATGTCTTGAGTGT 7678 Query 79701 CTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTG 79760 || ||||| ||||| || || |||||||| |||||| ||||||| |||| ||| Sbjct 7677 GTCATAGATACCCTCAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGATGACAGCTG 7618 Query 79761 TGGGT-TGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGG- 79818 | | || | ||||| || |||||||| || || | ||||| |||||| | ||||| Sbjct 7617 AGCCTGTGGT-GTACCAGCATTGAAGAGTGTTGGGGAGGCGTGTGTGAAGTA--TTTGGA 7561 Query 79819 -CTCATCAGATCGTACGTCTCCTTGACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGC 79877 ||| || | ||| ||||| || | | | || |||||||| ||||| ||||| Sbjct 7560 AGACATGAGGTTGTATGTCTCAATGGCCTTCTCAATATCCTCGCCGTGAATGCCAACCGC 7501 Query 79878 GACGCGCATGAAGAGGTACTGGGGC 79902 || ||||| | | || ||| ||| Sbjct 7500 CACACGCATAATCATGTGCTGTGGC 7476 Score = 239 bits (264), Expect = 5e-58 Identities = 429/622 (69%), Gaps = 6/622 (1%) Strand=Plus/Plus Query 19087 CAACGAGGGTGAGACGCCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGA 19146 ||||| | ||| | ||| ||| || | | ||||| || ||||| ||||| || ||||| Sbjct 7461 CAACGTTGCTGAAAGGCCACAGCACATGATTATGCGTGTGGCGGTTGGCATTCACGGCGA 7520 Query 19147 CGACCTCCCGCGAGTCCGCGAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGC 19206 || | | | | ||||||||| |||| ||| || | |||||| ||||| Sbjct 7521 GGATATTGAGAAGGCCATTGAGACATACAACCTCATGTCTTCCAAATACTTCACACACGC 7580 Query 19207 GACGCCGACCCTTTTCAACGCCGGTACGAACA-ACCCGCAGATGTCGAGCTGTTTCCTAG 19265 | || || || ||||| || ||||| | || | | ||| |||| ||| ||| | | Sbjct 7581 CTCCCCAACACTCTTCAATGCTGGTAC-ACCACAGGCTCAGCTGTCATCCTGCTTCTTGG 7639 Query 19266 TGGCTATGAAGGATGACAGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACA 19325 | | |||||||| || || |||||||| ||||| || || |||||| || || | Sbjct 7640 TCGACATGAAGGAGGATAGTATTGAGGGTATCTATGACACACTCAAGACATGTGCCATGA 7699 Query 19326 TCTCCAAGTGGTCCGGGGGTATCGGGATCCACTGC--TCGAATATCCGGTCGAGTGGTAC 19383 |||| ||| |||| |||||||| | || | ||| |||||| | | ||| | Sbjct 7700 TCTCAAAGACTGCCGGAGGTATCGGATTGAACATCCATCG--TATCCGTGCCACCGGTGC 7757 Query 19384 ACGAATCAATGGGACGAACGGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAA 19443 | || || || |||||| | |||||||||| || ||||||||||||||||| Sbjct 7758 ATACATTGCCGGTACCAACGGAAACTCGAACGGTATCGTTCCCATGCTCCGCGTCTTCAA 7817 Query 19444 CAACACGGCCAGGTACGTCAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTA 19503 |||||| ||||| ||||| ||||||| ||| ||| ||| || | ||||||||||| Sbjct 7818 CAACACTGCCAGATACGTTGACCAGGGTGGCAACAAGCGCCCTGGTGCCTTCGCCATCTA 7877 Query 19504 CCTCGAGCCATGGCACGCGGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGA 19563 | | |||||||||||||| || ||| | || ||| | || || | |||||| || | Sbjct 7878 CGTTGAGCCATGGCACGCTGATGTCTTCGAGTTCTTGGACTTGAGGAAGAACCACGGCAA 7937 Query 19564 CGAGGAGATGCGCTGTCGCGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGA 19623 ||||| | || || ||| | ||| || | ||||| ||||| || |||||| | Sbjct 7938 GGAGGAAGTCCGTGCCCGTGACTTGTTCTACGCTCTCTGGATCCCGGATCTCTTCATGAA 7997 Query 19624 GAAGGTTGAGAAGGACGAAGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACC 19683 | ||||||||| ||| || ||| || |||||||| ||||||||||||| | | Sbjct 7998 GCGTGTTGAGAAGAACGGTGACTGGACTCTCATGTGCCCCAACGAATGCCCTGGATTGGC 8057 Query 19684 CGACGTCTACGGCGAGGCGTTC 19705 ||||| ||||| || | |||| Sbjct 8058 GGACGTTTACGGTGATGAGTTC 8079 >seq2445 Length=7783 Score = 178 bits (196), Expect = 1e-39 Identities = 366/535 (68%), Gaps = 12/535 (2%) Strand=Plus/Plus Query 59593 TGTATAAGAAAGCGATCGGTTCATTCTGGTCCGTCGAGGAGATTGACCTCGCCGGAGACC 59652 |||| ||||| ||| | || |||||| | | ||||||||||||||| || |||| Sbjct 18 TGTACAAGAAGGCGGAAGCGTCTTTCTGGACTGCAGAGGAGATTGACCTCTCCAAGGACC 77 Query 59653 TGAAGGATTGGGACAAGC---TCAATTACGACGAGCAGCATTTCATCAAGATGGTCCTGG 59709 | | || ||| |||| | ||||| |||| |||| | |||||| || || | Sbjct 78 TTCACGACTGGAACAACCGTCTCAATGACGATGAGCGCTACTTCATCTCCCACGTTCTCG 137 Query 59710 CCTTCTTCGCGGCGAGTGATGGAATTGTGATGGAAAATATAGACATGAACTTTTCCAAGG 59769 | |||||||| ||| ||| |||||||| | || || | | | ||| || | Sbjct 138 CTTTCTTCGCCGCGTCTGACGGAATTGTCAACGAGAACCTTCTCGAGCGCTTCAGCAGTG 197 Query 59770 ATGTCCAGATTGCCGAGGCCCGGTCGTTCTACGCGTATC--AGTCGTTCAACGAGTCTAT 59827 | ||||| || | ||||| || | ||||||| || || | || | | |||| || Sbjct 198 AGGTCCAAATCCCAGAGGCTCGCTGCTTCTACG-GTTTCCAAATCATG-ATCGAGAACAT 255 Query 59828 CCACTCCGAGACGTACTCGCTCATGATCGATAAGTTGGTCAAGGATCCGGAAGAGAAGGC 59887 ||| ||||||| ||||| ||| | ||||| | | ||||||| | || || | Sbjct 256 TCACGCCGAGACATACTCCCTCCTCATCGACACATACATCAAGGAGCAGGCCCAGCGCAC 315 Query 59888 TGGTCTGTTCCGTGCCATAGAGACG-TCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCA 59946 || ||| |||||| ||||| |||| ||| | || | || || || ||||| Sbjct 316 ATACCTCTTCAATGCCATCGAGACCATCCCTTGCA-TCAAGAAGAAGGCCGACTGGGCTG 374 Query 59947 TGCAGTGGATG--AGTCCTGGAG-CATCATTTGCACAACGTCTCATAGCTTTTGCATGCG 60003 | |||||| || | ||| | | ||||| || || || | || || || || Sbjct 375 TCAGGTGGATCCAAGACAAGGATTCCACCTTTGCCCAGCGCCTGGTTGCCTTCGCTGCCG 434 Query 60004 TGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCC 60063 | || || ||||||||||| ||||||||| |||||||||||||||| |||||||| | Sbjct 435 TTGAGGGTATCTTCTTCTCCGGCTCGTTCGCCTCTATTTTCTGGCTCAAGAAGCGTGGTC 494 Query 60064 TCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCA 60118 ||||| | ||||||| ||||||||||||||| || ||||| || ||||| ||||| Sbjct 495 TCATGGCTGGCCTGACTTTCTCCAACGAGCTCATCTCCCGCGATGAGGGTCTCCA 549 >seq2493 Length=2855 Score = 172 bits (190), Expect = 6e-38 Identities = 390/579 (67%), Gaps = 17/579 (3%) Strand=Plus/Plus Query 20250 ACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGTCCGAGGGTATCCTCCAGCCGGACA 20309 ||||| | |||||||| | | |||| || || | |||| |||| ||||| || | Sbjct 230 ACGGCACATACGAGACCTACGAGGGATCTCCAGTGTCCAAGGGCGAGCTCCAATACGATA 289 Query 20310 TGTGGGGCGTCACTGAGAATGAGTTTTGGAGCG------CCCTCAAGGTTGAGATCAAGA 20363 ||||||||||||| | || | ||| | | |||||||| |||||||| Sbjct 290 TGTGGGGCGTCACCCCTACCGACCTGTGGGACTGGGACTCTCTCAAGGTCCAGATCAAGC 349 Query 20364 CCCACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATGCCGACCGCCTCGACCGCCCAGA 20423 ||||| | |||||||| | ||||| || |||||||| || || || ||| |||||| Sbjct 350 AGCACGGTGTCCGCAACTCCCTTCTCGTTGCACCCATGCCCACTGCTTCCACCTCCCAGA 409 Query 20424 TCATGGGGAACAACGAGGCTTTCGAGCCGTACACGACCAACATCTACTTGCGTCGTACAC 20483 | | || ||||||| |||||||| ||||| | |||||||||| ||| ||| | Sbjct 410 TTCTCGGCTTCAACGAGTGCTTCGAGCCATACACCTCGAACATCTACTCGCGCCGTGTCC 469 Query 20484 TGGCCGGTGAGTTCGTCATGGTAAACAAGCACCTGGTC-CGC---GACTTGCAGAAGATC 20539 |||| || |||||| || ||| ||| | | |||| | | |||||| | || Sbjct 470 TGGCTGGCGAGTTC--CA-GGTTGTCAATC-CTTGGTTGCTCAAGGACTTGGTCGACATG 525 Query 20540 GATATGTGGTCGCCCAAAATTAAGAATGAAATTGTCCGAGCCGGCGGGAGCGTCCAGG-C 20598 | ||||||| ||| || ||||| || || | ||| || | |||| | Sbjct 526 GGACTGTGGTCTGACAACATGAAGAACCGCATCATCGCGGACGGAGGATCCATCCAAAAC 585 Query 20599 ATTGGATATCCCCCAGA--ACCTCAAGGACATTTACAGGACCGTATGGGAAATCCCACAG 20656 ||| | ||||| || |||||| | |||| ||| || ||||| ||| | ||| Sbjct 586 ATTCCCAACATCCCAGCCGACATCAAGGCTCTCTACAAGACTGTCTGGGAGATCTCTCAG 645 Query 20657 AAGAGCATCATCGACATGGCGGCCGATCGCGGCGCCTACATCGACCAGTCCCAGTCGCTC 20716 | |||| || | ||||| || ||||| || |||| |||||| ||||||||||| ||| Sbjct 646 CGCACCATCGTCCAGATGGCCGCTGATCGTGGTGCCTTCATCGATCAGTCCCAGTCCCTC 705 Query 20717 AATGTCTTCATGGAGAATCCGAGCCTGGCGAAGCTGAGCTCCATGCATATGTACGGCTGG 20776 || || |||| || | || | ||| ||| | | ||||||||| | |||||| Sbjct 706 AACATCCACATGAAGGACCCAACAATGGGCAAGATCACCTCCATGCACTTTGCTGGCTGG 765 Query 20777 CACAAGGGGCTCAAGACGGGCATGTACTATCTGCGGACC 20815 | || |||||||| |||||||||||||| || ||| Sbjct 766 AAGCTCGGCCTCAAGACCGGCATGTACTATCTCCGTACC 804 Score = 140 bits (154), Expect = 4e-28 Identities = 317/477 (66%), Gaps = 6/477 (1%) Strand=Plus/Minus Query 78507 GAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTTGGTCGTGTACGGCTCGAAAGCCTC 78566 ||||||||| |||||| |||||| ||||||||| | ||||| |||||||| ||| Sbjct 483 GAACTCGCCAGCCAGGACACGGCGCGAGTAGATGTTCGAGGTGTATGGCTCGAAGCACTC 424 Query 78567 GTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGCATGGGTGCGACCAGTAGAGAATT 78626 |||| || | ||||||| ||| || || || ||||||||||| || || || || || Sbjct 423 GTTGAAGCCGAGAATCTGGGAGGTGGAAGCAGTGGGCATGGGTGCAACGAGAAGGGAGTT 364 Query 78627 CCGAAGACCATGCGTCTTGATCTCGACCTTTAG------GCCGTCCCAAAATTCATTCGC 78680 || | ||| ||| |||||||| |||||| || | |||||| | || | | Sbjct 363 GCGGACACCGTGCTGCTTGATCTGGACCTTGAGAGAGTCCCAGTCCCACAGGTCGGTAGG 304 Query 78681 CGCGATCCCCCACATGTCCGGTTGAAGGATACCCTCGGACGCCGGCGACCCCTTGAACGT 78740 | || |||||||| || ||| || |||| |||| | || || |||| | | || Sbjct 303 GGTGACGCCCCACATATCGTATTGGAGCTCGCCCTTGGACACTGGAGATCCCTCGTAGGT 244 Query 78741 CTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCATGACTCGAGCAGGGCCGCGTGGTACAC 78800 |||||| | || | || ||| || || ||| | || || ||||||| | Sbjct 243 CTCGTATGTGCCGTGAATCTGGGCCAGCTCAACGGACGCAGTCAAAGCGCCGTGGTAAAT 184 Query 78801 AGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCCTTGGTCTCGTCGAACGAAAGGCCGAG 78860 | ||| ||||| |||||| | |||| || ||||| | |||| ||| Sbjct 183 GGTCTCAAAGATCTGGGAGTTGAGGTGCTTAGCCTCGGGGGAATCGAAGGGCAGGCGGAG 124 Query 78861 CATCATGAAGACATCGGCCAGGCCCTGGACGCCGATAGCGATCGGTCGGTGGCGCATGTT 78920 || ||| |||| || || |||||||| |||| ||| | |||| ||| || | ||| Sbjct 123 GGCCAAGAATGCATCAGCAAGACCCTGGACACCGACAGCAACTGGTCTGTGACGGAAGTT 64 Query 78921 GCTCTTTCGGGCCGCCTCGGTCGGGTAAAAGTTCCGATCGATGACGCGGTTCAGGTT 78977 ||| | |||| ||||| ||||| |||| ||| |||| ||||||||| Sbjct 63 GCTGCGCCTGGCCTCCTCGACGGGGTAGTAGTTGACATCAATGATCTTGTTCAGGTT 7 Score = 89.7 bits (98), Expect = 6e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 78190 GTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTC 78249 || || | |||||||||||| |||||||| || |||||| || | |||||| Sbjct 803 GTACGGAGATAGTACATGCCGGTCTTGAGGCCGAGCTTCCAGCCAGCAAAGTGCATGGAG 744 Query 78250 GACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATG 78309 | | |||| ||| | |||| || |||| ||||||||| ||||||||||| |||||| Sbjct 743 GTGATCTTGCCCATTGTTGGGTCCTTCATGTGGATGTTGAGGGACTGGGACTGATCGATG 684 Query 78310 TACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGTC 78369 | ||||| || || || ||||| | || || | || | |||||||||| ||| Sbjct 683 AAGGCACCACGATCAGCGGCCATCTGGACGATGGTGCGCTGAGAGATCTCCCAGACAGTC 624 Query 78370 CGGTAAATGGCCTT 78383 ||| | ||||| Sbjct 623 TTGTAGAGAGCCTT 610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548500568916960