Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq1566 223 4e-53
seq2493 114 1e-20
seq2445 107 2e-18
>seq1566
Length=8448
Score = 223 bits (246), Expect = 4e-53
Identities = 479/709 (68%), Gaps = 24/709 (3%)
Strand=Plus/Plus
Query 53242 TGAGACGTACGACTTAATGAG--CCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTC 53299
|||||| ||| || | ||| ||||| ||||| || |||||| | ||||| || |||
Sbjct 7539 TGAGACATACAACCTCATGTCTTCCAAA--TACTTCACACACGCCTCCCCAACACTCTTC 7596
Query 53300 AACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGAC 53359
|| |||||||| || ||||| |||| ||||||| |||| | |||||||| ||
Sbjct 7597 AATGCTGGTACACCACAGGCTCAGCTGTCATCCTGCTTCTTGGTCGACATGAAGGAGGAT 7656
Query 53360 TCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGT 53419
|| || || ||||| || || |||||| |||||| ||||| ||| | ||
Sbjct 7657 AGTATTGAGGGTATCTATGACACACTCAAGACATGTGCCATGATCTCAAAGACTGCCGGA 7716
Query 53420 GGTATCGGTATCCACTGC--TCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGA 53477
|||||||| | || | ||| | ||||||| | ||| || || || || |
Sbjct 7717 GGTATCGGATTGAACATCCATCGTA--TCCGTGCCACCGGTGCATACATTGCCGGTACCA 7774
Query 53478 ACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACG 53537
|||| | | | || ||||| || ||||||||||||||||||||||| ||| | ||||
Sbjct 7775 ACGGAAACTCGAACGGTATCGTTCCCATGCTCCGCGTCTTCAACAACACTGCCAGATACG 7834
Query 53538 TCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACG 53597
| |||||||||| |||||| || | |||||||||||| | ||||| |||||||
Sbjct 7835 TTGACCAGGGTGGCAACAAGCGCCCTGGTGCCTTCGCCATCTACGTTGAGCCATGGCACG 7894
Query 53598 CCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCC 53657
| || | | ||||| | || || | ||| || || | || || | || ||
Sbjct 7895 CTGATGTCTTCGAGTTCTTGGACTTGAGGAAGAACCACGGCAAGGAGGAAGTCCGTGCCC 7954
Query 53658 GTGACCTGTT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGAC 53716
||||| |||| ||| ||||| ||||| ||||| ||||||||| | || |||||| ||
Sbjct 7955 GTGACTTGTTCTAC-GCTCTCTGGATCCCGGATCTCTTCATGAAGCGTGTTGAGAAGAAC 8013
Query 53717 GAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAG 53776
| || ||| || |||||||| ||||| ||||| || | || || ||||||||
Sbjct 8014 GGTGACTGGACTCTCATGTGCCCCAACGAATGCCCTGGATTGGCGGACGTTTACGGTGAT 8073
Query 53777 GAGTTTAACGAGATGTATCGGACGTACGCAGT-------TCAGGGCCGCTACAAGAAGAA 53829
||||| | | | || || |||| ||| |||| ||| ||||
Sbjct 8074 GAGTTCGAGGCTCTCTACGAGAAATACG-AGTCGGAGAAGAAGGGTCGC------AAGAC 8126
Query 53830 GGTCAAGGCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCC 53889
||||||| | || | ||| | | || ||| || ||| ||||| |||| ||
Sbjct 8127 TATCAAGGCCCAGAAGCTTTGGTACTCCATTCTCGAGTCTCAGACTGAGACAGGAAACCC 8186
Query 53890 GTACATGTGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938
| ||||| ||||||||| | |||| ||||||||||||||||||
Sbjct 8187 TTTCATGTTGTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAAC 8235
>seq2493
Length=2855
Score = 114 bits (126), Expect = 1e-20
Identities = 108/138 (78%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 55787 GCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCT 55846
|||||||||||||| | |||||| ||||||||||| || |||||| |||| || | ||
Sbjct 667 GCTGATCGTGGTGCCTTCATCGATCAGTCCCAGTCCCTCAACATCCACATGAAGGACCCA 726
Query 55847 TCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGT 55906
|| ||| |||| | | ||| ||||||||| || |||||| || |||||||| ||
Sbjct 727 ACAATGGGCAAGATCACCTCCATGCACTTTGCTGGCTGGAAGCTCGGCCTCAAGACCGGC 786
Query 55907 ATGTACTATCTGCGGACC 55924
||||||||||| || |||
Sbjct 787 ATGTACTATCTCCGTACC 804
>seq2445
Length=7783
Score = 107 bits (118), Expect = 2e-18
Identities = 322/493 (65%), Gaps = 12/493 (2%)
Strand=Plus/Minus
Query 74805 AGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAG 74864
||||||| ||| || ||||||||||| | ||| || || | ||| || || ||||
Sbjct 507 AGGCCAGCCATGAGACCACGCTTCTTGAGCCAGAAAATAGAGGCGAACGAGCCGGAGAAG 448
Query 74865 AAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATCGGAAGTC 74924
||||| || || || || ||||| || ||||| || || || | | ||| |||
Sbjct 447 AAGATACCCTCAACGGCAGCGAAGGCAACCAGGCGCTGGGCAAAGGTGGAATCCTT-GTC 389
Query 74925 ----ATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCAGGGACAGTATCGATCGC 74980
||||| | |||||| || || || |||| ||||| || ||||| ||
Sbjct 388 TTGGATCCACCTGACAGCCCAGTCGGCCTTCTTCTTGATGCAAGGGATGGTCTCGATGGC 329
Query 74981 TTGGAAGAGGCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTA 75040
| ||||||| || || | | ||||||| | |||| || | || |||||
Sbjct 328 ATTGAAGAGGTATGTGCGCTGGGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTA 269
Query 75041 CGTCTCCGAATGAATCGACTCGTTGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGC 75100
||||| | ||||| |||| | | ||| | ||||||| | || |||||||
Sbjct 268 TGTCTCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAGCGAGCCTCTGG 209
Query 75101 AATCTGTACATCCTT--TGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAG 75158
|| || || || | |||| || | | | |||| |||| || ||||| ||
Sbjct 208 GATTTGGACCTCACTGCTGAAGCGCTCGAGAAGGT--TCTCGTTGACAATTCCGTCAGAC 151
Query 75159 GCGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCATCGTCAGTGA---GTTTG 75215
|||||||| ||||| || || ||| |||| ||||||||||||| ||| | |||
Sbjct 150 GCGGCGAAGAAAGCGAGAACGTGGGAGATGAAGTAGCGCTCATCGTCATTGAGACGGTTG 91
Query 75216 TCCCAATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCGTCCAGAAACTCCCAATC 75275
| ||| || | |||||| | | ||||||||||| | ||||||||| | | |
Sbjct 90 TTCCAGTCGTGAAGGTCCTTGGAGAGGTCAATCTCCTCTGCAGTCCAGAAAGACGCTTCC 31
Query 75276 GCCTTTTTGTACA 75288
||||| |||||||
Sbjct 30 GCCTTCTTGTACA 18
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547191826733200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |