Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq1566 269 3e-67 seq335 176 5e-39 seq1054 167 3e-36 seq2493 109 6e-19 seq2445 93.3 5e-14 >seq1566 Length=8448 Score = 269 bits (298), Expect = 3e-67 Identities = 644/968 (67%), Gaps = 13/968 (1%) Strand=Plus/Minus Query 80794 GGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATCA 80853 ||||| |||| ||| |||| ||||||||| ||||||| |||| || || Sbjct 8441 GGGTAGTAGTTGACATCAATGATCTTGTTCAGGTTCTTAACAACAACCTGTGTGACCTCG 8382 Query 80854 TGAAGTTTCTGAAAGTCGAAT-TG--GTTCCCCTTCACAA---ATGCCGGAAGGCTCAGG 80907 ||||| ||||| |||||| || || ||| || | ||| | | || ||| ||| Sbjct 8381 TGAAGCTTCTGGAAGTCGTATGTGCCGTTGGCCATGTCAACGTACGTTGGCAGGGCAAGG 8322 Query 80908 GACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCAC 80967 || |||| || |||||||| ||||| || | | | | ||||||| || ||||||||| Sbjct 8321 GATGCCAAGTTACACACGGCAACCTCATCTGGAGCAGAGTACTCGACAATCTCCGTGCAC 8262 Query 80968 AAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCC 81027 | ||||| || ||||| ||||| |||||||| |||| ||||||||| ||| Sbjct 8261 AGGTTAGAGCTGCGGATGGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCC 8202 Query 81028 TTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATC 81087 ||||| ||||| | ||| | || ||||| ||| |||| ||| |||| || ||||| | Sbjct 8201 TTGTACAACATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATGGAGTACCAAAGC 8142 Query 81088 TCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTAAGCTTCG 81147 | | ||||||| |||||| || || | | | || || |||| | Sbjct 8141 TTCTGGGCCTTGATAGTCTTGCGACCCTTCTTCTCCGACTCGTATTTCTCGTAGAGAGCC 8082 Query 81148 TCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGTGC 81207 ||||||| |||||| || || | | | ||||| ||||| |||||||| || | Sbjct 8081 TCGAACTCATCACCGTAAACGTCCGCCAATCCAGGGCATTCGTTGGGGCACATGAGAGTC 8022 Query 81208 CAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAAC 81267 ||||| || ||||| ||| ||||||||| || ||||||||||| ||| |||| Sbjct 8021 CAGTCACCGTTCTTCTCAACACGCTTCATGAAGAGATCCGGGATCCAGAGAGCGTAGAAC 7962 Query 81268 AGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATG 81327 | ||| ||| || | ||||| | || ||||| | ||| || | || || | | Sbjct 7961 AAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTCCTCAAGTCCAAGAACTCGAAG 7902 Query 81328 ATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTGCG---ACGGCCACCC 81384 | || || ||||||||||| | || | ||||| | || ||| ||||||| Sbjct 7901 ACATCAGCGTGCCATGGCTCAACGTAGATGGCGAAGGCACCAGGGCGCTTGTTGCCACCC 7842 Query 81385 TGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCATCTGAC 81444 |||| ||||| | |||||| ||| || || || | ||| || | |||||| | || Sbjct 7841 TGGTCAACGTATCTGGCAGTGTTGTTGAAGACGCGGAGCATGGGAACGATACCGTTCGAG 7782 Query 81445 TGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCG--CACCTTGCTGATTGAAAGAC 81502 | ||||| ||||| | || | || |||| || || || ||| | | Sbjct 7781 TTTCCGTTGGTACCGGCAATGTATGCACCGGTGGCACGGATACGATG--GATGTTCAATC 7724 Query 81503 CGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCT 81562 |||| || || | |||||| ||| ||||| || | || ||||| || |||| Sbjct 7723 CGATACCTCCGGCAGTCTTTGAGATCATGGCACATGTCTTGAGTGTGTCATAGATACCCT 7664 Query 81563 CGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGAGC 81622 | || ||||| | |||||||| | |||||| ||| ||||| ||||| | || | Sbjct 7663 CAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGATGACAGCTGAGCCTGTGGTGTAC 7604 Query 81623 CGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTCATAGG 81682 | |||||||| |||||||||| ||||| |||| || | ||||| |||| || | Sbjct 7603 CAGCATTGAAGAGTGTTGGGGAGGCGTGTGTGAAGTATTTGGAAGACATGAGGTTGTATG 7544 Query 81683 TTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAAACATGT 81742 | || || | |||||| || |||||||| || | || |||||||||| ||||| Sbjct 7543 TCTCAATGGCCTTCTCAATATCCTCGCCGTGAATGCCAACCGCCACACGCATAATCATGT 7484 Query 81743 ACTGGGGC 81750 ||| ||| Sbjct 7483 GCTGTGGC 7476 >seq335 Length=36749 Score = 176 bits (194), Expect = 5e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || ||||| || || ||||||||||| || |||||||| ||||| Sbjct 30202 ATGCAAATCTTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTCC 30261 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| | ||| | || || |||||||||||||||||||| || |||||| Sbjct 30262 GACACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAG 30321 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || || || ||||| |||||||||| || ||||| | ||||| || Sbjct 30322 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTTTCGGACTACAAC 30381 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||| ||||| | |||||| | ||||| || || Sbjct 30382 ATCCAGAAGGAGTCCACCCTTCACTTGGTCTTGAGACTTCGTGGAGG 30428 >seq1054 Length=16682 Score = 167 bits (184), Expect = 3e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| ||||| || ||||| || || |||||||| || ||| Sbjct 1716 ATGCAGATTTTCGTCAAGACCCTTACGGGGAAGACGATCACGCTTGAGGTGGAATCATCC 1657 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| || | ||| | || ||||| || |||||||| |||||||| |||||| Sbjct 1656 GATACCATTGACAACGTAAAGTCGAAGATTCAAGATAAGGAGGGTATTCCTCCGGACCAG 1597 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || |||||||||||||| || ||||||| || ||| | | || || || Sbjct 1596 CAGCGCCTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGCACCTTGTCCGATTACAAC 1537 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| ||||| || ||| | || ||||||| || ||||| Sbjct 1536 ATTCAGAAGGAGTCCACCCTGCATTTGGTGCTGCGTCTGCGTGGTGG 1490 Score = 159 bits (176), Expect = 4e-34 Identities = 176/232 (76%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||||||||| | || || ||||| |||||||| ||||||||||| | Sbjct 1260 ATGCAGATTTTTGTCAAGACCTTGACTGGAAAGACCATTACTCTCGAGGTTGAGTCTTCT 1201 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| || | ||| | || || ||||| |||||||| || || || |||||| Sbjct 1200 GACACCATTGACAACGTCAAGTCGAAGATCCAGGATAAGGAGGGTATCCCACCGGACCAG 1141 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 ||||| || || ||||| || ||||| |||||||||| | || || ||| ||||| || Sbjct 1140 CAGCGCCTGATCTTTGCCGGGAAGCAGCTCGAGGATGGGAGGACGCTGAGC-GACTACAA 1082 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAA 27636 |||| ||||| ||||||||| | || | |||||||| ||||| ||| Sbjct 1081 CATCCAGAAGGAGAGCACTCTTCACTTGGTGCTCCGTCTTCGTGGTGGCCAA 1030 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| || || |||||||| || ||| | ||||| ||||| Sbjct 1944 ATGCAGATTTTCGTCAAGACCCTGACTGGCAAGACCATCACTTTGGAGGTCGAGTCGTCC 1885 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| ||||| | || |||||||| |||||||| |||||||| |||||| Sbjct 1884 GACACCATCGACAATGTGAAGTCGAAGATTCAGGATAAGGAGGGCATTCCTCCGGACCAG 1825 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || ||||| || || ||||| | ||||||| ||| || || | ||||| || Sbjct 1824 CAGCGCCTGATTTTCGCAGGAAAGCAGTTGGAGGATGGTCGCACTCTGTCCGACTACAAC 1765 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || ||||| || | || | |||||||| ||||| Sbjct 1764 ATTCAGAAGGAGTCGACTCTCCACTTGGTGCTTCGTCTTCGTGGTGG 1718 Score = 143 bits (158), Expect = 3e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| || ||||| ||||| ||||| || || || ||||| Sbjct 1488 ATGCAAATCTTCGTCAAGACTCTCACCGGAAAGACAATTACGCTGGAAGTCGAGTCGTCG 1429 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | || | ||| | || ||||| || |||||||| || || || |||||| Sbjct 1428 GATACCATCGATAACGTCAAGTCCAAGATTCAAGATAAGGAGGGCATCCCACCGGACCAG 1369 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || ||||| || || ||||| |||||||| | ||||| | | || || || Sbjct 1368 CAGCGCCTGATTTTCGCGGGCAAGCAGCTCGAGGACGGCCGTACTTTGTCTGATTACAAC 1309 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||| | ||||| || | || || || ||||| Sbjct 1308 ATCCAGAAGGAGTCCACATTACATCTTGTTCTCCGCCTCCGTGGTGG 1262 Score = 136 bits (150), Expect = 5e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 || |||||||| || || |||||||| ||||| |||| ||| | ||| | ||| Sbjct 2148 ACTGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGATACCATCGACAATGTTAAGAGC 2089 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || || || |||||||||||||| || || |||||||| ||||| || || || || ||| Sbjct 2088 AAGATCCAAGACAAGGAGGGAATCCCCCCGGACCAGCAACGTCTGATCTTCGCCGGAAAG 2029 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 ||||| ||||| | || ||||| | ||||| || |||| ||||| || || ||||| Sbjct 2028 CAACTTGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTTCAC 1969 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 | ||| ||||||| || ||||| Sbjct 1968 TTGGTCCTGCGTCTGCGTGGTGG 1946 >seq2493 Length=2855 Score = 109 bits (120), Expect = 6e-19 Identities = 110/143 (77%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 80038 GTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAA 80097 || || |||||||||||||| ||||||||||| ||||||||| | |||||| || Sbjct 803 GTACGGAGATAGTACATGCCGGTCTTGAGGCCGAGCTTCCAGCCAGCAAAGTGCATGGAG 744 Query 80098 CTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGATG 80157 ||| ||| | | ||| |||| || |||| |||||| || ||||| |||||| |||| Sbjct 743 GTGATCTTGCCCATTGTTGGGTCCTTCATGTGGATGTTGAGGGACTGGGACTGATCGATG 684 Query 80158 AAAGCCCCACGATCTGCCGCCAT 80180 || || |||||||| || ||||| Sbjct 683 AAGGCACCACGATCAGCGGCCAT 661 >seq2445 Length=7783 Score = 93.3 bits (102), Expect = 5e-14 Identities = 537/851 (63%), Gaps = 16/851 (2%) Strand=Plus/Plus Query 64321 TGGGAGCTTTACAAGAAAGCCATCGCAAGTTTCTGGACGGTCGAGGAGGTTGATCTCGCC 64380 ||| || | |||||||| || || ||||||||| | |||||| |||| ||| || Sbjct 11 TGGCAGATGTACAAGAAGGCGGAAGCGTCTTTCTGGACTGCAGAGGAGATTGACCTCTCC 70 Query 64381 AAGGATCTCAGCGACTGGGAAAACC---TAAACTCAC-AGGAACAGCACTTCATCAAGTT 64436 ||||| || ||||||| | |||| | || | || | || | |||||||| Sbjct 71 AAGGACCTTCACGACTGGAACAACCGTCTCAA-TGACGATGAGCGCTACTTCATCTCCCA 129 Query 64437 GGTCCTAGCATTCTTCGCATCAAGTGACGGAATTGTGTTTGAGAA---TTTGGACCTAAA 64493 || || || |||||||| | |||||||||||| ||||| | | || | Sbjct 130 CGTTCTCGCTTTCTTCGCCGCGTCTGACGGAATTGTCAACGAGAACCTTCTCGAGCGC-- 187 Query 64494 TTTTACAAAGGATGTTCAGATCCCAGAGGCGCGGTCATTCTATGCGTATCAGGGATTTAA 64553 || | | || || || ||||||||||| || | ||||| | | || | | Sbjct 188 -TTCAGCAGTGAGGTCCAAATCCCAGAGGCTCGCTGCTTCTACGGTTTCCAAATCATGAT 246 Query 64554 CGAAAGTATTCATGGCGAGACGTATTCGCTCATGATTGACAAGTTTGTTCGGGATCCTGT 64613 ||| | ||||| | |||||| || || ||| | || |||| | | ||| | | Sbjct 247 CGAGAACATTCACGCCGAGACATACTCCCTCCTCATCGACACATACATCAAGGAGCAGGC 306 Query 64614 CGAGAAGGATGGAC-TGTTCAGGGCTATAGAGACTGTACCCGCTGTTACTAAAAAGGCTG 64672 | || | | || | |||| || || ||||| | || | | || ||||| | Sbjct 307 CCAGC-GCACATACCTCTTCAATGCCATCGAGACCATCCCTTGCATCAAGAAGAAGGCCG 365 Query 64673 AATGGGCCATCCGGTGGATGAAT--CGTGGGT-CGTCGTTTGGTCAGCGTCTCGCAGCTT 64729 | ||||| || ||||||| | | || | | | |||| ||||| || | || | Sbjct 366 ACTGGGCTGTCAGGTGGATCCAAGACAAGGATTCCACCTTTGCCCAGCGCCTGGTTGCCT 425 Query 64730 TTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTAAAAA 64789 | || || || || || ||||| || || || ||| |||||||||||||| || | Sbjct 426 TCGCTGCCGTTGAGGGTATCTTCTTCTCCGGCTCGTTCGCCTCTATTTTCTGGCTCAAGA 485 Query 64790 AGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAGGGGC 64849 |||| || || ||| | || ||| | || || |||||||| ||||| || || ||||| | Sbjct 486 AGCGTGGTCTCATGGCTGGCCTGACTTTCTCCAACGAGCTCATCTCCCGCGATGAGGGTC 545 Query 64850 TCCACCAAGAATTTGCGGTTACCCTGTTCAGCCACCTCAAGGACAAACCATCACATGGGA 64909 ||||| || || || ||| ||| |||||| | || ||| | | Sbjct 546 TCCACACTGACTTCGCCTGCCTCCTCTTCTCCCACCTTAGACACCGCCCAAGCAAGCAGG 605 Query 64910 CTATAATTGATATAGTAAAATCGGCTGTAGAAATTGAAAAGGAATTCATTACTGCCGCGC 64969 || | ||| | | | |||||| | || || | || ||| | || | || | Sbjct 606 CTGTCCAGGATGTCATCACCGAGGCTGTCGCGATCGAGCAAGAGTTCTTGACAGAGGCAC 665 Query 64970 TTCCGTGTCGTCTCATCGGCATGGATGCCGATAAGATGAAACAGTATATCGAATTTGTAG 65029 | || ||| || |||||||| | ||| | |||||| || || |||||||| || | Sbjct 666 TCCCATGTGCGCTGCTCGGCATGAACGCCAACTTGATGAAGCAATACATCGAATTCGTCG 725 Query 65030 CAGATCGCCTGCTTACTCAGTTTGGTATTAAGCCCTACTGGAATTCTTCAAATCCATTTG 65089 | || | ||||| | | |||| || | || || ||| | || || |||| Sbjct 726 CCGACAGGCTGCTGCTTTCCCTCGGTAACGAGAAGTTCTACAAGTCTACCAACCCCTTTG 785 Query 65090 ACTGGATGGAGACGATCAGCCTGGAGGGGAAGACTAACTTTTTTGAAAAGAGGGTAGGTG 65149 ||| ||||||| ||| ||||| || ||||| ||||| || || ||| | || | | Sbjct 786 ACTTCATGGAGAACATCTCCCTGGCAGGAAAGACCAACTTCTTCGAGAAGCGTGTCGCCG 845 Query 65150 ATTACTCAAAG 65160 | ||| |||| Sbjct 846 ACTACCAAAAG 856 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570285206538080