Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq1054 122 8e-23
>seq1054
Length=16682
Score = 122 bits (134), Expect = 8e-23
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || || || || ||| | || || ||||| |||||| | |||
Sbjct 1716 ATGCAGATTTTCGTCAAGACCCTTACGGGGAAGACGATCACGCTTGAGGTGGAATCATCC 1657
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||| | || || || |||||||| || || || || || || || ||
Sbjct 1656 GATACCATTGACAACGTAAAGTCGAAGATTCAAGATAAGGAGGGTATTCCTCCGGACCAG 1597
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| | || | || || || || |||| || | ||| | ||||||||||||
Sbjct 1596 CAGCGCCTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGCACCTTGTCCGATTACAAC 1537
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| |||||||| ||| | |||||||| ||||| |||| ||||| ||
Sbjct 1536 ATTCAGAAGGAGTCCACCCTGCATTTGGTGCTGCGTCTGCGTGGTGGTAT 1487
Score = 113 bits (124), Expect = 4e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || || ||||| ||||| ||| | ||||| || ||||| || ||||
Sbjct 1488 ATGCAAATCTTCGTCAAGACTCTCACCGGAAAGACAATTACGCTGGAAGTCGAGTCGTCG 1429
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || || | ||||| || |||||||| || || ||||| ||||| || ||
Sbjct 1428 GATACCATCGATAACGTCAAGTCCAAGATTCAAGATAAGGAGGGCATCCCACCGGACCAG 1369
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| | || | ||| ||||| || | || ||| | || | || |||||||||
Sbjct 1368 CAGCGCCTGATTTTCGCGGGCAAGCAGCTCGAGGACGGCCGTACTTTGTCTGATTACAAC 1309
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || |||||||| || |||||| | ||| | || | || ||||| ||
Sbjct 1308 ATCCAGAAGGAGTCCACATTACATCTTGTTCTCCGCCTCCGTGGTGGTAT 1259
Score = 113 bits (124), Expect = 4e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || ||||| |||||| | || ||| | || || || |||||
Sbjct 1944 ATGCAGATTTTCGTCAAGACCCTGACTGGCAAGACCATCACTTTGGAGGTCGAGTCGTCC 1885
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | || || || ||||| || || || ||||| || || || ||
Sbjct 1884 GACACCATCGACAATGTGAAGTCGAAGATTCAGGATAAGGAGGGCATTCCTCCGGACCAG 1825
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| | || | ||| || || || ||||| || || || | ||||| ||||||
Sbjct 1824 CAGCGCCTGATTTTCGCAGGAAAGCAGTTGGAGGATGGTCGCACTCTGTCCGACTACAAC 1765
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| ||||||||||| | || ||||| | ||| | || ||||| ||
Sbjct 1764 ATTCAGAAGGAGTCGACTCTCCACTTGGTGCTTCGTCTTCGTGGTGGTAT 1715
Score = 105 bits (116), Expect = 6e-18
Identities = 148/208 (71%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 27010 TGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAAC 27069
|||| |||||| | || || ||||| || || | ||||| | || || | || ||
Sbjct 2150 TGACTGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGATACCATCGACAATGTTAAGA 2091
Query 27070 AAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCA 27129
|| || |||||||| || || || || || || || || ||| | || | |||||| |
Sbjct 2090 GCAAGATCCAAGACAAGGAGGGAATCCCCCCGGACCAGCAACGTCTGATCTTCGCCGGAA 2031
Query 27130 AACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTAC 27189
| ||| | || ||| | ||| | ||||| |||||||| || |||||||||||| | |
Sbjct 2030 AGCAACTTGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTTC 1971
Query 27190 ATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
| ||||| ||||| |||| ||||| ||
Sbjct 1970 ACTTGGTCCTGCGTCTGCGTGGTGGTAT 1943
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434899187479680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |