Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq1054 89.7 4e-13 >seq1054 Length=16682 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 || || || ||| |||| ||| ||||| || | || ||||| || || || |||| Sbjct 1623 GATAAGGAGGGTATTCCTCCGGACCAGCAGCGCCTGATCTTTGCTGGTAAGCAGCTGGAG 1564 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 || | |||| |||||||||||||||||| || || ||| ||| |||||||||| || Sbjct 1563 GATGGCCGCACCTTGTCCGATTACAACATTCAGAAGGAGTCCACCCTGCATTTGGTGCTG 1504 Query 28003 CGTTTGCGTGGCGG 28016 ||| ||||||| || Sbjct 1503 CGTCTGCGTGGTGG 1490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355847072784018