Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq335 185 2e-41
seq1054 161 2e-34
seq1566 111 4e-19
>seq335
Length=36749
Score = 185 bits (204), Expect = 2e-41
Identities = 176/225 (78%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949
|| ||||||||| | ||| | |||||| |||||||| || |||||||| || |||| |||
Sbjct 30426 TCCACGAAGTCTCAAGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAG 30367
Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009
||| | ||||| || ||||||||||| |||||||| ||||| || ||||| || ||||
Sbjct 30366 GGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAAT 30307
Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069
||| ||||||||||||||||| || || || ||||| ||||| || || |||||
Sbjct 30306 TCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCCACCTC 30247
Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| ||||| ||||| ||||| || ||||| || || | |||||
Sbjct 30246 AAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 30202
>seq1054
Length=16682
Score = 161 bits (178), Expect = 2e-34
Identities = 169/222 (76%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | || || | |||||||||| ||| || |||||||| || || || ||
Sbjct 1039 ACGAAGACGGAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGT 1098
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
||| ||||| || |||||||| || || ||||| ||||| || ||||| || || | ||
Sbjct 1099 CCTCCCATCCTCGAGCTGCTTCCCGGCAAAGATCAGGCGCTGCTGGTCCGGTGGGATACC 1158
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||| ||||||||||| || ||||| || ||||||||||| |||||||||||
Sbjct 1159 CTCCTTATCCTGGATCTTCGACTTGACGTTGTCAATGGTGTCAGAAGACTCAACCTCGAG 1218
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||| || |||||||| || | ||||| ||||| | ||||||
Sbjct 1219 AGTAATGGTCTTTCCAGTCAAGGTCTTGACAAAAATCTGCAT 1260
Score = 149 bits (164), Expect = 1e-30
Identities = 166/222 (75%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | || || | ||| ||||| ||||| || || ||||| || || | || ||
Sbjct 1723 ACGAAGACGAAGCACCAAGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCGGACAGAGT 1782
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| ||||| |||| |||||| |||||||| || ||||| || ||||| ||||||| ||
Sbjct 1783 GCGACCATCCTCCAACTGCTTTCCTGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCC 1842
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||| ||||| ||||| ||||| || ||||||||||| || || ||||| |
Sbjct 1843 CTCCTTATCCTGAATCTTCGACTTCACATTGTCGATGGTGTCGGACGACTCGACCTCCAA 1902
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|||||| ||||| || || || ||||| || || | ||||||
Sbjct 1903 AGTGATGGTCTTGCCAGTCAGGGTCTTGACGAAAATCTGCAT 1944
Score = 145 bits (160), Expect = 2e-29
Identities = 154/203 (76%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971
|| || |||||||| || || ||||| ||||| | | ||| | ||||| |||||||||
Sbjct 1514 TGCAGGGTGGACTCCTTCTGAATGTTGTAATCGGACAAGGTGCGGCCATCCTCCAGCTGC 1573
Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031
|| || || ||||| ||||| || ||||| ||||||| || ||||| || || |||||
Sbjct 1574 TTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTATCTTGAATCTTC 1633
Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091
|| ||||| || ||||| || || ||| ||||| || ||||||||||| |||||
Sbjct 1634 GACTTTACGTTGTCAATGGTATCGGATGATTCCACCTCAAGCGTGATCGTCTTCCCCGTA 1693
Query 211092 AGAGTCTTTACAAACACCTGCAT 211114
|| ||||| || || | ||||||
Sbjct 1694 AGGGTCTTGACGAAAATCTGCAT 1716
Score = 125 bits (138), Expect = 2e-23
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| ||||| || | |||||||| || |||||||| ||||| | | || | || ||
Sbjct 1277 AGAACAAGATGTAATGTGGACTCCTTCTGGATGTTGTAATCAGACAAAGTACGGCCGTCC 1336
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| ||||| || ||||| || ||||| || || | || ||||| ||
Sbjct 1337 TCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCT 1396
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| ||||| || ||||| |||||||| || || || || || || || || |||
Sbjct 1397 TGAATCTTGGACTTGACGTTATCGATGGTATCCGACGACTCGACTTCCAGCGTAATTGTC 1456
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| ||||||||||| || || | |||||
Sbjct 1457 TTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 1488
>seq1566
Length=8448
Score = 111 bits (122), Expect = 4e-19
Identities = 196/282 (70%), Gaps = 8/282 (3%)
Strand=Plus/Minus
Query 178088 CCAAAGTTCTTTTGGTTGCTCTTTC---TGCAAATGGCATCTTTGTACGCAATGAAGGGC 178144
|||| |||||| ||||||||||| | ||||| ||||| |||||| ||||| ||
Sbjct 8240 CCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAA---GCATCCTTGTACAACATGAAAGGG 8184
Query 178145 ATTCCCACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTC 178204
|||| ||||| |||| | |||||||| | |||||||| |||||| || ||||
Sbjct 8183 TTTCCTGTCTCAGTCTGAGACTCGAGAATGGAGTACCAAAGCTTCTGGGCCTTGATAGTC 8124
Query 178205 TTTTTGGCTTTTCCT-TCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATA 178263
|| | | ||| | || |||||| || | |||||| ||||||| || || ||
Sbjct 8123 -TTGCGACCCTTCTTCTCCGACTCGTATTTCTCGTAGAGAGCCTCGAACTCATCACCGTA 8065
Query 178264 GACATCATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTT 178323
|| || | | || || || |||||||| | |||| |||| | ||||| | ||
Sbjct 8064 AACGTCCGCCAATCCAGGGCATTCGTTGGGGCACATGAGAGTCCAGTCACCGTTCTTCTC 8005
Query 178324 CACTCGTTTCATGAAGAGGTCAGAGGTCCAGATGGCATAGAA 178365
|| || ||||||||||| || | | |||||| || |||||
Sbjct 8004 AACACGCTTCATGAAGAGATCCGGGATCCAGAGAGCGTAGAA 7963
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159099514321910
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |