Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq335 149 1e-30
seq1054 134 3e-26
seq2697 89.7 1e-12
>seq335
Length=36749
Score = 149 bits (164), Expect = 1e-30
Identities = 166/222 (75%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||||||||||| ||| | ||| || ||||| || || |||| ||||| || | | ||
Sbjct 30423 ACGAAGTCTCAAGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGT 30364
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| ||||| || |||||||| || |||||||| || || || ||||| || ||||| ||
Sbjct 30363 GCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCC 30304
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||| |||||||| ||| ||| ||||| ||||| || | ||||| || |
Sbjct 30303 CTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCCACCTCAAG 30244
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| ||||||||||||| || || | ||| | ||||||
Sbjct 30243 GGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 30202
>seq1054
Length=16682
Score = 134 bits (148), Expect = 3e-26
Identities = 163/222 (73%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| || | ||| || | || || ||||| || || || | |||||||||| ||| ||
Sbjct 1495 ACGCAGACGCAGCACCAAATGCAGGGTGGACTCCTTCTGAATGTTGTAATCGGACAAGGT 1554
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| ||||| || |||||||| ||||| ||||| || || || ||||| || ||||||||
Sbjct 1555 GCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATACC 1614
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||||| ||||| ||||| ||| || || ||||| || || | |||||| || |
Sbjct 1615 CTCCTTATCTTGAATCTTCGACTTTACGTTGTCAATGGTATCGGATGATTCCACCTCAAG 1674
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|||||||||||| ||||| | || || | ||| | |||||
Sbjct 1675 CGTGATCGTCTTCCCCGTAAGGGTCTTGACGAAAATCTGCAT 1716
Score = 131 bits (144), Expect = 4e-25
Identities = 162/222 (73%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | || || | ||||||||| || || || || | ||||| |||| || |||
Sbjct 1723 ACGAAGACGAAGCACCAAGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCGGACAGAGT 1782
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| ||||| || | |||||| || ||||| || || || || ||||| || ||||| ||
Sbjct 1783 GCGACCATCCTCCAACTGCTTTCCTGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCC 1842
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||||| || || ||||| ||||||| ||||||||||| || | || || || ||
Sbjct 1843 CTCCTTATCCTGAATCTTCGACTTCACATTGTCGATGGTGTCGGACGACTCGACCTCCAA 1902
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| |||||||| |||| || || | ||| | |||||
Sbjct 1903 AGTGATGGTCTTGCCAGTCAGGGTCTTGACGAAAATCTGCAT 1944
Score = 122 bits (134), Expect = 2e-22
Identities = 147/200 (74%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| || | |||||| | ||| || || || || || |||| ||||| |||| | ||
Sbjct 1951 ACGCAGACGCAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGT 2010
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| || || || || ||||| || |||||||| || ||||| ||||| || || || ||
Sbjct 2011 GCGGCCGTCCTCAAGTTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGGATTCC 2070
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||||||||||||||||| ||| ||| |||||||| || |||| || || || |
Sbjct 2071 CTCCTTGTCTTGGATCTTGCTCTTAACATTGTCGATGGTATCGGAGGACTCGACCTCAAG 2130
Query 225672 CGTGATCGTCTTGCCCGTCA 225691
||||| |||||||| ||||
Sbjct 2131 GGTGATGGTCTTGCCAGTCA 2150
Score = 113 bits (124), Expect = 1e-19
Identities = 149/207 (72%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | || || | ||| |||||| || || |||| ||||| ||| || ||
Sbjct 1039 ACGAAGACGGAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGT 1098
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
|||||||| || ||||||||||| || ||||| || || || ||||| || || |||||
Sbjct 1099 CCTCCCATCCTCGAGCTGCTTCCCGGCAAAGATCAGGCGCTGCTGGTCCGGTGGGATACC 1158
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||||| || |||||||| ||| || || |||||||| || | || || || |
Sbjct 1159 CTCCTTATCCTGGATCTTCGACTTGACGTTGTCAATGGTGTCAGAAGACTCAACCTCGAG 1218
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTT 225698
|| || ||||| || ||||| || ||
Sbjct 1219 AGTAATGGTCTTTCCAGTCAAGGTCTT 1245
>seq2697
Length=541
Score = 89.7 bits (98), Expect = 1e-12
Identities = 81/102 (79%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731
|||||||||||| ||||||||||| | |||||| || | ||||| || || || || |
Sbjct 396 TTCAGGATGACCGAAAAATCAGAAAAGATGTTGGTATAATATAGGGTCACCACCACCAGC 455
Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAAAAC 370773
| ||||| || ||||||||||||||||||||||||||
Sbjct 456 AGCTTCAAAGAATGATGTATTAAAATTTCTATCAGTTAAAAC 497
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192477202932596
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |