Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq1566 187 3e-42 >seq1566 Length=8448 Score = 187 bits (206), Expect = 3e-42 Identities = 515/783 (66%), Gaps = 10/783 (1%) Strand=Plus/Minus Query 77759 GATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAA 77818 ||| || || || || | ||||||||||| ||||| | ||||| || | || || Sbjct 8247 GATGGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTACAACATGAA 8188 Query 77819 CGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTAT 77878 || | || || ||| |||| || |||| ||| || | ||| | | ||| | || Sbjct 8187 AGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATGGAGTACCAAA-GCTTCTGGGCCTTG- 8130 Query 77879 CATAGATTTGTATCGCCTCT-CTCTT--TCATATTGA--GTATATAGCCGTTCAAATTCA 77933 |||| ||| | | ||| ||| || |||| ||| | |||| || || ||| Sbjct 8129 -ATAGTCTTGCGACCCTTCTTCTCCGACTCGTATTTCTCGTAGAGAGCC--TCGAACTCA 8073 Query 77934 TCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCA 77993 || || |||| || |||||||||||||||| || |||||||| | | ||||||||| Sbjct 8072 TCACCGTAAACGTCCGCCAATCCAGGGCATTCGTTGGGGCACATGAGAGTCCAGTCACCG 8013 Query 77994 TCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGG 78053 | | || ||| || ||||| |||||||| || ||||| ||||| || | || ||| Sbjct 8012 TTCTTCTCAACACGCTTCATGAAGAGATCCGGGATCCAGAGAGCGTAGAACAAGTCACGG 7953 Query 78054 GTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAA 78113 | | ||| || || || ||||| | | || | ||||| | | ||||| Sbjct 7952 GCACGGACTTCCTCCTTGCCGTGGTTCTTCCTCAAGTCCAAGAACTCGAAGACATCAGCG 7893 Query 78114 TGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATA 78173 |||||||| || | || || || | | ||||| || || || || ||||| || | Sbjct 7892 TGCCATGGCTCAACGTAGATGGCGAAGGCACCAGGGCGCTTGTTGCCACCCTGGTCAACG 7833 Query 78174 TATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTT 78233 |||||||| ||||| || | || | | ||| |||| |||||||| || |||| || Sbjct 7832 TATCTGGCAGTGTTGTTGAAGACGCGGAGCATGGGAACGATACCGTTCGAGTTTCCGTTG 7773 Query 78234 GTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCT 78293 || || | ||| || || | || || ||| | ||| | || || ||||| Sbjct 7772 GTACCGGCAATGTATGCACCGGTGGCACGGATACGATGGATGTTCAATCCGATACCTCCG 7713 Query 78294 GCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCA 78353 || |||| || || | || || || | ||| || ||||||||||| ||||| || Sbjct 7712 GCAGTCTTTGAGATCATGGCACATGTCTTGAGTGTGTCATAGATACCCTCAATACTATCC 7653 Query 78354 TCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAAT 78413 ||| |||||| | | || ||| |||| ||| || || || ||||| || Sbjct 7652 TCCTTCATGTCGACCAAGAAGCAGGATGACAGCTGAGCCTGTGGTGTACCAGCATTGAAG 7593 Query 78414 AATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCT 78473 | ||| || || || || || || |||| ||| | || |||||||| ||||| || Sbjct 7592 AGTGTTGGGGAGGCGTGTGTGAAGTATTTGGAAGACATGAGGTTGTATGTCTCAATGGCC 7533 Query 78474 GATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTT 78533 || || ||| ||||| || ||||| |||||||| | ||| ||||| || ||| Sbjct 7532 TTCTCAATATCCTCGCCGTGAATGCCAACCGCCACACGCATAATCATGTGCTGTGGCCTT 7473 Query 78534 TCA 78536 ||| Sbjct 7472 TCA 7470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694638113005760