Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq1054 125 2e-23
seq335 123 6e-23
>seq1054
Length=16682
Score = 125 bits (138), Expect = 2e-23
Identities = 159/219 (73%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | ||| |||||||| | || ||||| || |||||||||||||| | ||||| |
Sbjct 1270 GAGGCGGAGAACAAGATGTAATGTGGACTCCTTCTGGATGTTGTAATCAGACAAAGTACG 1329
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
|| || || || || || ||||| || || | ||||||||||| | ||| || ||
Sbjct 1330 GCCGTCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTC 1389
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| |||||||| || ||||| | || | | | || || ||| ||||| || ||
Sbjct 1390 CTTATCTTGAATCTTGGACTTGACGTTATCGATGGTATCCGACGACTCGACTTCCAGCGT 1449
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||| || || || ||||||||||| ||||||| |||||
Sbjct 1450 AATTGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 1488
Score = 105 bits (116), Expect = 2e-17
Identities = 149/208 (72%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| |||||||| ||| || ||||||||||| ||| | || |||||||| || |
Sbjct 1054 CAAG-TGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTCCCATCCTCGA 1112
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| |||||||| ||||| || | ||||||||||| | ||| || ||||| || || |
Sbjct 1113 GCTGCTTCCCGGCAAAGATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTGGA 1172
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || ||||| | || | | |||| ||| ||| || || |||||||| || || |
Sbjct 1173 TCTTCGACTTGACGTTGTCAATGGTGTCAGAAGACTCAACCTCGAGAGTAATGGTCTTTC 1232
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| || | ||||| || || | ||||||
Sbjct 1233 CAGTCAAGGTCTTGACAAAAATCTGCAT 1260
Score = 95.1 bits (104), Expect = 3e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| || | ||| || || ||||| || || ||||||||||||| || || | |||||
Sbjct 1505 AGCACCAAATGCAGGGTGGACTCCTTCTGAATGTTGTAATCGGACAAGGTGCGGCCATCC 1564
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || || || ||||| || | ||||||||||| | || || ||||| |||
Sbjct 1565 TCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTATCT 1624
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
||||| || || || | || | | | || || || || ||||| || || ||
Sbjct 1625 TGAATCTTCGACTTTACGTTGTCAATGGTATCGGATGATTCCACCTCAAGCGTGATCGTC 1684
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| ||||| || ||||| ||||| | ||||||
Sbjct 1685 TTCCCCGTAAGGGTCTTGACGAAAATCTGCAT 1716
Score = 95.1 bits (104), Expect = 3e-14
Identities = 149/210 (71%), Gaps = 5/210 (2%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || ||||| ||||| || || |||||||| |||| | ||| | ||||| || |
Sbjct 1738 CAAG-TGGAGAGTCGACTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGACCATCCTCCA 1796
Query 151957 G--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014
||||| || ||||| || || | ||||||||||| | || || ||||| || ||
Sbjct 1797 ACTGCTTT--CCTGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTATCCTG 1854
Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074
||| || || ||| | || | | |||| || ||| || || | ||| || || ||
Sbjct 1855 AATCTTCGACTTCACATTGTCGATGGTGTCGGACGACTCGACCTCCAAAGTGATGGTCTT 1914
Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||| || || ||||| ||||| | ||||||
Sbjct 1915 GCCAGTCAGGGTCTTGACGAAAATCTGCAT 1944
Score = 89.7 bits (98), Expect = 1e-12
Identities = 135/190 (71%), Gaps = 4/190 (2%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
||||| | ||||| || ||||| || ||||||||||| |||| | || | || ||
Sbjct 1961 AGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 2020
Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010
|| || ||||| ||||||||||| || | |||||||||| | |||||| ||||| |
Sbjct 2021 TCAAGTTGCTTT--CCGGCGAAGATCAGACGTTGCTGGTCCGGGGGGATTCCCTCCTTGT 2078
Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070
|||| || || || ||| | || | | | || || ||| || ||||| || || |
Sbjct 2079 CTTGGATCTTGCTCTTAACATTGTCGATGGTATCGGAGGACTCGACCTCAAGGGTGATGG 2138
Query 152071 TTTTGCCCGT 152080
| ||||| ||
Sbjct 2139 TCTTGCCAGT 2148
>seq335
Length=36749
Score = 123 bits (136), Expect = 6e-23
Identities = 158/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946
||||| | ||| | ||||| || ||||| || ||||||||||| || | | || |
Sbjct 30419 AGTCTCAAGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGG 30360
Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006
||||| || || || ||||||||||| || | ||||||||||| | ||||| |||
Sbjct 30359 CCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCC 30300
Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066
|| || || || || |||||| | || | |||| || ||| || ||||| ||
Sbjct 30299 TTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCCACCTCAAGGGTG 30240
Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||| |||||||| || ||||||||||||| |||||
Sbjct 30239 ATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 30202
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153768555715314
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |