Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq335 152 4e-32 seq1054 150 1e-31 >seq335 Length=36749 Score = 152 bits (168), Expect = 4e-32 Identities = 168/222 (76%), Gaps = 4/222 (2%) Strand=Plus/Minus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179 |||||||| |||| |||||| ||| |||||| ||||||||||| || | || ||| Sbjct 30419 AGTCTCAAGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGG 30360 Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 | || || |||||||| ||||| ||||||| |||||||| || | || | || ||| Sbjct 30359 CCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCC 30300 Query 44240 TTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCG 44297 || ||| ||||| ||| || ||| | || ||||||| || |||||||| | | Sbjct 30299 TTGTCCTGGATCTTGGACTTGACATTGT--CGATAGTGTCGGACGACTCCACCTCAAGGG 30242 Query 44298 TAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGA 44339 | || ||||| ||||| ||||||||||||||||||||||||| Sbjct 30241 TGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCATGA 30200 >seq1054 Length=16682 Score = 150 bits (166), Expect = 1e-31 Identities = 176/235 (75%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || || | ||| | || ||||| || || ||| |||||| || |||||||| Sbjct 1483 TTGCATACCACCACGCAGACGCAGCACCAAATGCAGGGTGGACTCCTTCTGAATGTTGTA 1542 Query 44164 ATCGG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGAT 44222 ||||| | || | ||| | || ||||||||||| || |||||||||| |||||||| | Sbjct 1543 ATCGGACAAGGT-GCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGT 1601 Query 44223 CTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGG 44282 | | ||| | ||| ||||| || |||||| ||| | | | ||||| |||| | Sbjct 1602 CCGGAGGAATACCCTCCTTATCTTGAATCTTCGACTTTACGTTGTCAATGGTATCGGATG 1661 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||||| | ||| |||||||| ||||| |||||||| ||||| || ||||| Sbjct 1662 ATTCCACCTCAAGCGTGATCGTCTTCCCCGTAAGGGTCTTGACGAAAATCTGCAT 1716 Score = 136 bits (150), Expect = 3e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||| |||||| ||||||||||| ||||||||||| ||| || | | | || || Sbjct 1051 CACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTCCCATCCTC 1110 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||||||||||||||||| |||||||| || | || | ||| ||||| ||| Sbjct 1111 GAGCTGCTTCCCGGCAAAGATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTG 1170 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 |||||| ||| | | | |||||||| | || || ||||| | ||||| ||||| Sbjct 1171 GATCTTCGACTTGACGTTGTCAATGGTGTCAGAAGACTCAACCTCGAGAGTAATGGTCTT 1230 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || | |||||| || || || ||||| Sbjct 1231 TCCAGTCAAGGTCTTGACAAAAATCTGCAT 1260 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 |||||| |||||||||||||| | | || |||| || |||||||| || || || Sbjct 1297 CTCCTTCTGGATGTTGTAATCAGACAAAGTACGGCCGTCCTCGAGCTGCTTGCCCGCGAA 1356 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 |||| |||||||| || | || | || ||||| || ||||| ||| | | Sbjct 1357 AATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCTTGAATCTTGGACTTGACGTT 1416 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | ||||| || | || || || |||| |||||| |||||||| ||||| ||||| || Sbjct 1417 ATCGATGGTATCCGACGACTCGACTTCCAGCGTAATTGTCTTTCCGGTGAGAGTCTTGAC 1476 Query 44326 GAAGATTTGCAT 44337 |||||||||||| Sbjct 1477 GAAGATTTGCAT 1488 Score = 96.9 bits (106), Expect = 2e-15 Identities = 148/209 (71%), Gaps = 4/209 (2%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | ||| | || |||| |||||| || |||||| ||||||||||| || Sbjct 1942 CATACCACCACGCAGACGCAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTC 2001 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || ||| ||| |||| || || ||||| ||||| ||||||| ||| ||||| || | Sbjct 2002 GGAGAGGGTGCGGCCGTCCTCAAGTTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCCGG 2061 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGAT 44284 || | || ||||| || ||||| ||| || ||| | ||||| |||| ||| Sbjct 2062 GGGGATTCCCTCCTTGTCTTGGATCTTGCTCTTAACATTGT--CGATGGTATCGGAGGAC 2119 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGT 44313 || ||||| | || || ||||| || || Sbjct 2120 TCGACCTCAAGGGTGATGGTCTTGCCAGT 2148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359974894988478