Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq335 167 2e-36
seq1054 150 2e-31
>seq335
Length=36749
Score = 167 bits (184), Expect = 2e-36
Identities = 167/215 (78%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710
|| |||| || || ||| ||||||||| ||||| ||||| || |||||||| | ||
Sbjct 30413 AAGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCATCC 30354
Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770
|||||||||||||||||||| ||||||||||| ||||||| ||||| | ||||||||||
Sbjct 30353 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCC 30294
Query 41771 ATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCG 41828
||| || ||| || | || | ||||||| |||||||||||| | || || |
Sbjct 30293 TGGATCTTGGACTTGACATTGTCG--ATAGTGTCGGACGACTCCACCTCAAGGGTGATAG 30236
Query 41829 TTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
| || |||||||| ||||| ||||| || ||||||
Sbjct 30235 TCTTGCCCGTCAGGGTCTTCACGAAGATTTGCATG 30201
>seq1054
Length=16682
Score = 150 bits (166), Expect = 2e-31
Identities = 174/229 (76%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | ||||| || || || ||||||||||||||| ||||||||
Sbjct 1718 CCACCACGAAGACGAAGCACCAAGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAC 1777
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| | || || | |||||| || ||||| ||||||||||| ||||||| |||
Sbjct 1778 AGAGTGCGACCATCCTCCAACTGCTTTCCTGCGAAAATCAGGCGCTGCTGGTCCGGAGGA 1837
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813
| || |||||| ||| ||| | || | |||| || | | | |||||| |||||| |
Sbjct 1838 ATGCCCTCCTTATCC-TGAATCTTCGACTTC-ACATTGTCGATGGTGTCGGACGACTCGA 1895
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||||| || || || || || ||||| ||||| ||||||||||||||
Sbjct 1896 CCTCCAAAGTGATGGTCTTGCCAGTCAGGGTCTTGACGAAAATCTGCAT 1944
Score = 147 bits (162), Expect = 2e-30
Identities = 171/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | ||||| |||||| ||| ||||||||||||||| || |||||
Sbjct 1490 CCACCACGCAGACGCAGCACCAAATGCAGGGTGGACTCCTTCTGAATGTTGTAATCGGAC 1549
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
| |||||| | || || |||||||| || || || ||||||||||| ||||||| |||
Sbjct 1550 AAGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGA 1609
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| | |||||| | | ||| | || | | ||| | | | || ||| || |||||
Sbjct 1610 ATACCCTCCTTAT-CTTGAATCTTCGACTTTACGTTGTCAATGGTATCGGATGATTCCAC 1668
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||| | ||| ||||| || ||||| || ||||| ||||||||||||||
Sbjct 1669 CTCAAGCGTGATCGTCTTCCCCGTAAGGGTCTTGACGAAAATCTGCAT 1716
Score = 127 bits (140), Expect = 2e-24
Identities = 167/229 (73%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || || ||||| | ||||| || || |||||||||||||| ||||| ||||||
Sbjct 1033 GCCACCACGAAGACGGAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCT 1092
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
|| || | | | || ||||||||||| ||||| || ||||||||||| ||||||| ||
Sbjct 1093 CAGCGTCCTCCCATCCTCGAGCTGCTTCCCGGCAAAGATCAGGCGCTGCTGGTCCGGTGG 1152
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813
| | |||||| ||| ||| || ||| ||| | | | ||||| ||||| |
Sbjct 1153 GATACCCTCCTTATCCTGGATCTTCGACTT-GACGTTGTCAATGGTGTCAGAAGACTCAA 1211
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||| | || || || || || |||| ||||| || |||||||||||
Sbjct 1212 CCTCGAGAGTAATGGTCTTTCCAGTCAAGGTCTTGACAAAAATCTGCAT 1260
Score = 107 bits (118), Expect = 2e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || | || ||||| | ||| ||||||||| ||||| || || ||
Sbjct 1262 CCACCACGGAGGCGGAGAACAAGATGTAATGTGGACTCCTTCTGGATGTTGTAATCAGAC 1321
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
| || || |||| |||||||||||||| ||||| ||||||||||| ||||||| ||
Sbjct 1322 AAAGTACGGCCGTCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGG 1381
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| || |||||| | | ||| | || | | ||| | | || || |||||| ||
Sbjct 1382 ATGCCCTCCTTAT-CTTGAATCTTGGACTTGACGTTATCGATGGTATCCGACGACTCGAC 1440
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||| ||| || || || || || || ||||| ||||| || |||||
Sbjct 1441 TTCCAGCGTAATTGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 1488
Score = 107 bits (118), Expect = 2e-18
Identities = 104/134 (78%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | |||| || || || ||||||||| ||||| |||||||||
Sbjct 1946 CCACCACGCAGACGCAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 2005
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| |||| || || ||||| |||||||| ||||| || || ||||||| |||
Sbjct 2006 AGGGTGCGGCCGTCCTCAAGTTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGG 2065
Query 41756 ACGCTCTCCTTGTC 41769
| | |||||||||
Sbjct 2066 ATTCCCTCCTTGTC 2079
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462283577720800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |