Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq514 107 4e-18
seq512 105 1e-17
>seq514
Length=32850
Score = 107 bits (118), Expect = 4e-18
Identities = 200/294 (68%), Gaps = 0/294 (0%)
Strand=Plus/Minus
Query 319374 GTAGTAACTCGCTGATTCGGGACGCTTCTTCACGAACTCGGACAGATTTCCCTTGTACTT 319433
|||||||||| | ||||| || ||| ||||| |||| || || ||||||||
Sbjct 17585 GTAGTAACTCTTAGCCTCGGGCTTCTGCTTGACGAAGTCGGCCAAGTTACCCTTGTAGCA 17526
Query 319434 CTTCAGCTTTAGGTTAGGTTCGTAATGGATAATAGAGGTGCAAACAGCGTCGAGGAACCC 319493
|||||| ||| ||||| ||| ||| ||||| || | |||||||| ||
Sbjct 17525 GGCCAGCTTCTTTCCAGGCTCGTAGTGGTAGATATCAGTGCAGACCTCATCGAGGAAGCC 17466
Query 319494 GGAGTCGTGTGACACAATCACGCACGAAACGTCCTTAAGGTTGATCAGGTATTCAATCAA 319553
||||||||| || ||||||| ||| | || | || | ||||||| || |
Sbjct 17465 GGAGTCGTGAGAAACAATCAGCGACGTGATCTCGGTGTGGGTCTTCAGGTACTCCTGGAG 17406
Query 319554 CCACCTCACGTTAGACACAGAAAGATGGTTGGTCGGCTCGTCAAGAAGCAGTAGCTTTGC 319613
|||| | ||||| | ||| | ||||| || || ||||||||||| || | | ||
Sbjct 17405 CCACTTGACGTTGGCAACATCCAAGTGGTTAGTAGGTTCGTCAAGAAGAAGAACATCGGC 17346
Query 319614 GTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTCATTTTCCACCCTCCGGAAAG 319667
|||| | ||| || | ||||||||||| ||||| ||||| || ||||| ||
Sbjct 17345 CTTCATCAACATAGCCCTGGCAAGAGCGAGCTTCATCTTCCATCCACCGGACAG 17292
>seq512
Length=30657
Score = 105 bits (116), Expect = 1e-17
Identities = 308/469 (66%), Gaps = 8/469 (2%)
Strand=Plus/Plus
Query 230173 TTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGTTTC 230232
|||||| |||||||||| |||| | || || ||||| | || ||||| |||
Sbjct 17844 TTTGCCCAGCGTCTCGTTGCCTTTGCCGCCGTCGAGGGTATCTTCTTCTCCGGCTCCTTC 17903
Query 230233 TGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAG 230292
|||| || ||||| ||| || | ||| ||||||| | || ||||||
Sbjct 17904 GCATCCATTTTCTGGCTCAAGAAGCGTGGCCTCATGGCTGGCCTGACCTTCTCGAACGAG 17963
Query 230293 TTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTATGTATTCAAAGCTC 230352
||||| || |||||||||||||| | |||| | || | | || | |||
Sbjct 17964 CTCATCTCCCGTGACGAGGGTCTCCACACTGACTTCGCCTGCCTCCTCTTCTCCCACCTC 18023
Query 230353 CAGAACAAGCTACCATTCGAGACGG---TCAAACAAATCATTACAGAAGCAGTTGAAAAC 230409
|| || || ||| | ||| || || || | ||||||| ||||| || | |
Sbjct 18024 AAGCACC-GC--CCAAGCAAGAAGGCCGTCCAAGACGTCATTACCGAAGCCGTCACCATC 18080
Query 230410 GAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACTT 230469
|| |||||||| | ||| || |||| ||| || | ||||||||||| |||||
Sbjct 18081 GAGCAGGAGTTCTTGACTGAGGCACTTCCCTGTGCTCTGCTCGGCATGAACGC-CAACTT 18139
Query 230470 -ATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAA 230528
||| || ||||| || ||||| ||||| | | | || | || || |||||||
Sbjct 18140 GATGAAGCAATACATTGAGTTCGTCGCCGATAGACTGCTGCTTTCTCTCGGAAACGAGAA 18199
Query 230529 AGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGAC 230588
||||| || | ||||| || | || |||||| ||| || || || |||||
Sbjct 18200 GTACTACAAGTCGACCAACCCATTCGACTTCATGGAGAACATCTCCCTGGCGGGCAAGAC 18259
Query 230589 CAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637
|||||||||||| ||||| ||| ||||| || | | ||||||| |||
Sbjct 18260 CAACTTCTTCGAGAAGCGCGTCGCCGACTACCAAAAGACTGGTGTCATG 18308
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057774055831550
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |