Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq512 118 1e-21 >seq512 Length=30657 Score = 118 bits (130), Expect = 1e-21 Identities = 471/729 (65%), Gaps = 22/729 (3%) Strand=Plus/Minus Query 16674 TTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCT 16733 ||||||| ||| ||||| || ||||| ||||| || |||||| | || || || |||| Sbjct 18294 TTTGGTAGTCGGCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCCGCCAGGGAGATGTTCT 18235 Query 16734 CCATGAAATCAAAAGGATTAGTAG-CTGAAAATATTTTAGAGTACCCCAGTTCGGCGATT 16792 ||||||| || || || || || | || | || || || || || | Sbjct 18234 CCATGAAGTCGAATGGGTTGGTCGACTTGTAGTACTTCTC-GTTTCCGAGAGAAAGCAGC 18176 Query 16793 AATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGA 16852 | |||||| || || || || || ||||| ||| || | | |||||| || | ||| Sbjct 18175 AGTCTATCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGTTCATGCCGAGCAGA 18116 Query 16853 CGTACCGG-AAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAAT 16911 | || || ||| || || ||||| || ||||| || || ||||| |||| | Sbjct 18115 -GCACAGGGAAGTGCCTCAGTCAAGAACTCCTGCTCGATGGTGACGGCTTCGGTAATGAC 18057 Query 16912 A-CTAGCAACTCGTTC---CTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATG 16967 || | | | ||| || || ||||| || || || || | || || | Sbjct 18056 GTCTTGGACGGCCTTCTTGCTTGGGCGGTGCTTG----AGGTGGGAGAAGAGGAGGCAGG 18001 Query 16968 CGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGG 17027 |||| || || | |||||||| | | ||| || ||||| || || |||| || | Sbjct 18000 CGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAGAAGGTCAGGCCAG 17941 Query 17028 GCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATAC 17087 ||| || || ||||| | ||| || || | ||||| || || || ||||| |||| Sbjct 17940 CCATGAGGCCACGCTTCTTGAGCCAGAAAATGGATGCGAAGGAGCCGGAGAAGAAGATAC 17881 Query 17088 CCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCC 17147 ||||||||| ||||| || | | || | ||| | || | || |||| | |||| Sbjct 17880 CCTCGACGGCGGCAAAGGCAACGAGACGCTGGGCAAAGGTAGAATCCTTGTCTTGGATCC 17821 Query 17148 ATTTCTG-CA-CCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAA 17205 | ||| || |||| || || || | ||| |||||| || || || ||||| || || Sbjct 17820 A--CCTGACAGCCCAGTCAGCCTTCTTCTTAATGCAAGGAATAGTCTCGATGGCATTGAA 17763 Query 17206 TA---ATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACAT 17262 | || | || ||| | || | || || || |||||||| ||| ||| | Sbjct 17762 GAGGTATGTGCGTTGAGCCT---GCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGT 17706 Query 17263 TTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTAT 17322 |||| ||| |||||||| || || || || ||||| ||||| ||||| || | || Sbjct 17705 CTCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAGCGGGCCTCTGGGAT 17646 Query 17323 TTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGC 17382 ||| || || | ||| || || || || ||||| || || ||||| ||||| Sbjct 17645 TTGGACCTCACTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCAGAGGCGGC 17586 Query 17383 GAAAAACGC 17391 ||| || || Sbjct 17585 GAAGAAAGC 17577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517521760555800