Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq512 118 1e-21
>seq512
Length=30657
Score = 118 bits (130), Expect = 1e-21
Identities = 471/729 (65%), Gaps = 22/729 (3%)
Strand=Plus/Minus
Query 16674 TTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCT 16733
||||||| ||| ||||| || ||||| ||||| || |||||| | || || || ||||
Sbjct 18294 TTTGGTAGTCGGCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCCGCCAGGGAGATGTTCT 18235
Query 16734 CCATGAAATCAAAAGGATTAGTAG-CTGAAAATATTTTAGAGTACCCCAGTTCGGCGATT 16792
||||||| || || || || || | || | || || || || || |
Sbjct 18234 CCATGAAGTCGAATGGGTTGGTCGACTTGTAGTACTTCTC-GTTTCCGAGAGAAAGCAGC 18176
Query 16793 AATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGA 16852
| |||||| || || || || || ||||| ||| || | | |||||| || | |||
Sbjct 18175 AGTCTATCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGTTCATGCCGAGCAGA 18116
Query 16853 CGTACCGG-AAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAAT 16911
| || || ||| || || ||||| || ||||| || || ||||| |||| |
Sbjct 18115 -GCACAGGGAAGTGCCTCAGTCAAGAACTCCTGCTCGATGGTGACGGCTTCGGTAATGAC 18057
Query 16912 A-CTAGCAACTCGTTC---CTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATG 16967
|| | | | ||| || || ||||| || || || || | || || |
Sbjct 18056 GTCTTGGACGGCCTTCTTGCTTGGGCGGTGCTTG----AGGTGGGAGAAGAGGAGGCAGG 18001
Query 16968 CGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGG 17027
|||| || || | |||||||| | | ||| || ||||| || || |||| || |
Sbjct 18000 CGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAGAAGGTCAGGCCAG 17941
Query 17028 GCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATAC 17087
||| || || ||||| | ||| || || | ||||| || || || ||||| ||||
Sbjct 17940 CCATGAGGCCACGCTTCTTGAGCCAGAAAATGGATGCGAAGGAGCCGGAGAAGAAGATAC 17881
Query 17088 CCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCC 17147
||||||||| ||||| || | | || | ||| | || | || |||| | ||||
Sbjct 17880 CCTCGACGGCGGCAAAGGCAACGAGACGCTGGGCAAAGGTAGAATCCTTGTCTTGGATCC 17821
Query 17148 ATTTCTG-CA-CCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAA 17205
| ||| || |||| || || || | ||| |||||| || || || ||||| || ||
Sbjct 17820 A--CCTGACAGCCCAGTCAGCCTTCTTCTTAATGCAAGGAATAGTCTCGATGGCATTGAA 17763
Query 17206 TA---ATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACAT 17262
| || | || ||| | || | || || || |||||||| ||| ||| |
Sbjct 17762 GAGGTATGTGCGTTGAGCCT---GCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGT 17706
Query 17263 TTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTAT 17322
|||| ||| |||||||| || || || || ||||| ||||| ||||| || | ||
Sbjct 17705 CTCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAGCGGGCCTCTGGGAT 17646
Query 17323 TTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGC 17382
||| || || | ||| || || || || ||||| || || ||||| |||||
Sbjct 17645 TTGGACCTCACTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCAGAGGCGGC 17586
Query 17383 GAAAAACGC 17391
||| || ||
Sbjct 17585 GAAGAAAGC 17577
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517521760555800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |