Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq3654 172 7e-38
seq512 123 3e-23
>seq3654
Length=7047
Score = 172 bits (190), Expect = 7e-38
Identities = 415/623 (67%), Gaps = 4/623 (1%)
Strand=Plus/Minus
Query 53951 TCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 54010
|||||||| || || | || | |||| ||||| ||||| | || ||||| | | |
Sbjct 3743 TCAAACTCATCGCCGTAGACGTCCGCCAAACCAGGGCATTCGTTGGGGCACATGAGAGTC 3684
Query 54011 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC-TATAAA 54069
|| || |||| | || || || ||||| ||||||||||| ||||| ||||| || ||
Sbjct 3683 CAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCAGAGAGCGTAGAAC 3624
Query 54070 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 54129
|| || | || | |||||| ||||| |||||| | | || |||||| | |
Sbjct 3623 AAG-TCACGGGCACGGACTTCCTCCTTTCCGTGGTTCTTTCTCAAGTCCAGGAACTCAAA 3565
Query 54130 AATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCC 54189
| ||| | ||||| || || | ||| |||| | | | ||||| || ||||| || ||
Sbjct 3564 GACATCCGCGTGCCATGGCTCGACGTAGATGGCGAAAGCGCCAGGACGCTTGTTGCCACC 3505
Query 54190 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 54249
||| || | |||||| || ||||| || | || | | ||| || | ||||| || ||
Sbjct 3504 CTGGTCAACGTATCTTGCAGTGTTGTTGAAGACACGGAGCATAGGGACGATACCGTTCGA 3445
Query 54250 TGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACC 54309
|| ||||| |||| || || ||| ||||||| ||| ||| | ||
Sbjct 3444 GTTTCCGTTGGTACCGGCAATGTATGCACCAGTGGCACGGATACGGTGAATGTTCAATCC 3385
Query 54310 TATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGT-TTTAACGTATCATAGATGCCCT 54368
|| || || || | || ||||| | || || ||| || | || |||||||| ||||
Sbjct 3384 GATGCCTCCAGCAGTCTTTGAGATCATGGCACA-CGTCTTGAGTGTGTCATAGATACCCT 3326
Query 54369 CTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTC 54428
| |||||||| ||| |||||| | | || ||| |||| ||| | || |
Sbjct 3325 CAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGATGACAGCTGGGCCTGTGGTGTAC 3266
Query 54429 CCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACG 54488
| ||||| || | || || |||||||| || || |||| ||| | || ||||| |
Sbjct 3265 CAGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAAATATTTGGAAGACATGAGGTTGTATG 3206
Query 54489 TCTCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGT 54548
||||||| | || |||||| ||||| || || || |||||||| | |||||
Sbjct 3205 TCTCGATGGTCTTCTCAATATCCTCGCCGTGAATGCCAACGGCAACACGCATAATCATGT 3146
Query 54549 GCTGAGGTCTTTCAACGATCTTG 54571
|||| || || ||| | | ||||
Sbjct 3145 GCTGCGGCCTCTCAGCAACCTTG 3123
>seq512
Length=30657
Score = 123 bits (136), Expect = 3e-23
Identities = 555/868 (64%), Gaps = 20/868 (2%)
Strand=Plus/Minus
Query 23831 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTC 23890
||| || || | |||||||| || | || || || ||||| || || || || || |
Sbjct 18308 CATGACACCAGTCTTTTGGTAGTCGGCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCCGC 18249
Query 23891 TAATGATATATTTTCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCC 23950
| || || || |||||||| ||| |||| ||||| || ||| | ||| | | |
Sbjct 18248 CAGGGAGATGTTCTCCATGAAGTCGAATGGGTTGGTCGACTTGTAG-TACTTCTCGTTTC 18190
Query 23951 CAATTCAGAAATCAA---TCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACA 24007
| | ||||| || |||||| ||||| ||||| || ||| ||||||| |
Sbjct 18189 CGAG--AGAAAGCAGCAGTCTATCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGC 18132
Query 24008 ATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGAC 24067
||||| || | || | ||||| ||| |||| | || || || || || | |||
Sbjct 18131 GTTCATGCCGAGCAGAGCACAGGGAAGTGCCTCAGTCAAGAACTCCTGCTCGATGGTGAC 18072
Query 24068 CGCGTCTGTTATAATAGATCTT--ACTGT-TTCTTCACTCGGTGGATACAATAAATGTTT 24124
|| || || || | |||| || | ||||| | || || | | | ||
Sbjct 18071 GGCTTCGGTAATGACG--TCTTGGACGGCCTTCTTGCTTGGGCGG-TGCTTGAGGTGGGA 18015
Query 24125 AAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGA 24184
|| | | || ||||| || ||| ||||||||||| | || | ||||| ||
Sbjct 18014 GAAGAGGAGGCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGA 17955
Query 24185 AAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCC 24244
|| || || || | ||| ||||||||||| || ||||| || ||||| || || || ||
Sbjct 17954 GAAGGTCAGGCCAGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGATGCGAAGGAGCC 17895
Query 24245 AGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATA---ACCGGC 24301
|| ||||| || || || || || |||||||||| || | | || | | |
Sbjct 17894 GGAGAAGAAGATACCCTCGACGGCGGCAAAGGCAACGAGACGCTGGGCAAAGGTAGAATC 17835
Query 24302 GCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTC 24361
|||| || |||||| | |||||| || |||||||| || | ||||| || |||||
Sbjct 17834 CTTGTCTTGGATCCACCTGACAGCCCAGTCAGCCTTCTTCTTAATGCAAGGAATAGTCTC 17775
Query 24362 TATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAG 24421
|| ||||| ||||| || | || | || || | ||||| || || | ||
Sbjct 17774 GATGGCATTGAAGAGGTATGTGCGTTGAGCCTGCTCCTTGATGTATGTGTCGATGAGGAG 17715
Query 24422 ACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGC 24481
|| | || | |||||||| || || ||||| || |||||||| || | ||
Sbjct 17714 GGAGTATGTCTCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAGCGGGC 17655
Query 24482 CTCGGTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTC 24541
||| | || || || || | | || || || | || || || || ||||||||
Sbjct 17654 CTCTGGGATTTGGACCTCACTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTC 17595
Query 24542 ACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATA---TTTTTCGTCTGGTGTTA- 24597
| ||| || || || || | || || || || || | ||||| | || |
Sbjct 17594 AGAGGCGGCGAAGAAAGCGAGAACGTGGGAGATGAAGTAGCGCTCATCGTC-GTTGAGAC 17536
Query 24598 GTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATG 24657
| || ||||| || | | || || || | ||| | || || | ||||| || ||||
Sbjct 17535 GGTTGTTCCAGTCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGCGGTCCAGAAAGATG 17476
Query 24658 CCTCTGCCTTTTTATACATATTCCAGAT 24685
|||| ||||| || ||||| | ||||||
Sbjct 17475 CCTCGGCCTTCTTGTACATCTGCCAGAT 17448
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593694251698800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |