Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters Query= NC_001824.1 Length=102653 Score E Sequences producing significant alignments: (Bits) Value seq1166 95.1 8e-15 >seq1166 Length=8473 Score = 95.1 bits (104), Expect = 8e-15 Identities = 111/150 (74%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 12780 AATGGTCATGCGACTAGGAAAGGCATGTGGGTTAATGATTAAATCAGGTACTATGCCATC 12839 ||| ||||| ||| ||||| ||| || ||||| ||||| | |||||| || || || || Sbjct 6672 AATTGTCATACGAGAAGGAATGGCGTGGGGGTTGATGATAAGATCAGGCACAATACCCTC 6731 Query 12840 TTTAGTGAAAGGCATGTTTTCTTGGGCATAAATCATACCACAGGTACCTTTTTGTGCGGT 12899 |||||||||||| | ||||||| ||| | |||||| ||| |||||||| || Sbjct 6732 ACGAGTGAAAGGCATATCTTCTTGGCGGTAAGTGATACCAATGGTTCCTTTTTGACCGTG 6791 Query 12900 AAAAGAAGCAAATTTATCTCCTATTTCAGG 12929 |||||| || ||||| || |||| ||| Sbjct 6792 GCGAGAAGCGAACTTATCACCAATTTGAGG 6821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328350052828990