Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq3654 89.7 1e-12
>seq3654
Length=7047
Score = 89.7 bits (98), Expect = 1e-12
Identities = 294/454 (65%), Gaps = 5/454 (1%)
Strand=Plus/Plus
Query 249277 TTCGCCATGTATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAG 249336
|||||||| || | || |||||||| ||| | || |||||||||||||||| ||||
Sbjct 3529 TTCGCCATCTACGTCGAGCCATGGCACGCGGATGTCTTTGAGTTCCTGGACTTGAGAAAG 3588
Query 249337 AACAACGGCAACGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGAC 249396
||| |||| || ||| | | || |||||| | ||||||| || ||| || | ||
Sbjct 3589 AACCACGGAAAGGAGGAAGTCCGTGCCCGTGACTTGTTCTACGCTCTCTGGATCCCTGAT 3648
Query 249397 TTGTTCATGCGCCGCGTCAAGGCCGACGGCGATTGGACGCTTCTTTCTCCGTCCGACGCC 249456
| |||||| || ||| || ||||||| ||||| || | | || ||| |
Sbjct 3649 CTCTTCATGAAGCGTGTCGAGAAGAACGGCGACTGGACTCTCATGTGCCCCAACGAATGC 3708
Query 249457 CCGGACCTCATCGATCTACACGGCGCCGACTTCGACCAAGCCTATAAGAAATACGAATCC 249516
|| | | || | |||||| || || || ||| ||| |||||
Sbjct 3709 CCTGGTTTGGCGGACGTCTACGGCGATGAGTTTGAGGCGCTCTACGAGAGCTACGAGAAG 3768
Query 249517 AACGGCATCG---GCAAGACAATCAAGGCTCGGACCCTTTTTGCGAAGGTGGTGGAGTCC 249573
| || | | ||||||| |||||||| | || |||| | | |||||
Sbjct 3769 GAGGGTAAGGGTCGCAAGACCATCAAGGCCCAGAAGCTTTGGTACTCCATTCTCGAGTCT 3828
Query 249574 CAGATAGAGACAGGGGGGCCGTATTAT-TTGTTCAAAGACGCGTGCAACGCCAAGAGTAA 249632
|||| |||||| || || | | || ||| ||| || || |||||| |||||| ||
Sbjct 3829 CAGACTGAGACA-GGAAACCCTTTCATGCTGTACAAGGATGCCTGCAACCGCAAGAGCAA 3887
Query 249633 CCAACGGCATCTTGGTACCATCCGCTCGTCAAATCTCTGTGCAGAGGTGATTCAATACTC 249692
||| | | || |||||||||||| || || || || ||||| | | | |||||
Sbjct 3888 CCAGAAGAACCTCGGTACCATCCGCAGCTCCAACCTTTGCACAGAGATTGTCGAGTACTC 3947
Query 249693 GTCCAAGGAGGAGATTGCCGTCTGCAACCTGGCA 249726
|| || ||| ||||||| |||||| |||||
Sbjct 3948 TGCCCCAGATGAGGTTGCCGTGTGCAACTTGGCA 3981
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073715703126080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |