Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq3654 89.7 1e-12 >seq3654 Length=7047 Score = 89.7 bits (98), Expect = 1e-12 Identities = 294/454 (65%), Gaps = 5/454 (1%) Strand=Plus/Plus Query 249277 TTCGCCATGTATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAG 249336 |||||||| || | || |||||||| ||| | || |||||||||||||||| |||| Sbjct 3529 TTCGCCATCTACGTCGAGCCATGGCACGCGGATGTCTTTGAGTTCCTGGACTTGAGAAAG 3588 Query 249337 AACAACGGCAACGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGAC 249396 ||| |||| || ||| | | || |||||| | ||||||| || ||| || | || Sbjct 3589 AACCACGGAAAGGAGGAAGTCCGTGCCCGTGACTTGTTCTACGCTCTCTGGATCCCTGAT 3648 Query 249397 TTGTTCATGCGCCGCGTCAAGGCCGACGGCGATTGGACGCTTCTTTCTCCGTCCGACGCC 249456 | |||||| || ||| || ||||||| ||||| || | | || ||| | Sbjct 3649 CTCTTCATGAAGCGTGTCGAGAAGAACGGCGACTGGACTCTCATGTGCCCCAACGAATGC 3708 Query 249457 CCGGACCTCATCGATCTACACGGCGCCGACTTCGACCAAGCCTATAAGAAATACGAATCC 249516 || | | || | |||||| || || || ||| ||| ||||| Sbjct 3709 CCTGGTTTGGCGGACGTCTACGGCGATGAGTTTGAGGCGCTCTACGAGAGCTACGAGAAG 3768 Query 249517 AACGGCATCG---GCAAGACAATCAAGGCTCGGACCCTTTTTGCGAAGGTGGTGGAGTCC 249573 | || | | ||||||| |||||||| | || |||| | | ||||| Sbjct 3769 GAGGGTAAGGGTCGCAAGACCATCAAGGCCCAGAAGCTTTGGTACTCCATTCTCGAGTCT 3828 Query 249574 CAGATAGAGACAGGGGGGCCGTATTAT-TTGTTCAAAGACGCGTGCAACGCCAAGAGTAA 249632 |||| |||||| || || | | || ||| ||| || || |||||| |||||| || Sbjct 3829 CAGACTGAGACA-GGAAACCCTTTCATGCTGTACAAGGATGCCTGCAACCGCAAGAGCAA 3887 Query 249633 CCAACGGCATCTTGGTACCATCCGCTCGTCAAATCTCTGTGCAGAGGTGATTCAATACTC 249692 ||| | | || |||||||||||| || || || || ||||| | | | ||||| Sbjct 3888 CCAGAAGAACCTCGGTACCATCCGCAGCTCCAACCTTTGCACAGAGATTGTCGAGTACTC 3947 Query 249693 GTCCAAGGAGGAGATTGCCGTCTGCAACCTGGCA 249726 || || ||| ||||||| |||||| ||||| Sbjct 3948 TGCCCCAGATGAGGTTGCCGTGTGCAACTTGGCA 3981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073715703126080