Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq1689 116 3e-21
>seq1689
Length=16827
Score = 116 bits (128), Expect = 3e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
||||| ||||| || ||||||||||||||||||||| ||| ||| | || |||
Sbjct 15466 ACCAAATGCAGAGTCGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCATCCTCC 15407
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || || ||||| |||| ||||| ||||| ||||| | ||||||||||| |
Sbjct 15406 AGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCTTGA 15347
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | | ||| ||||||||| | ||||||||||||
Sbjct 15346 ATCTTGGACTTGACGTTGTCAATGGTATCCGACGACTCCACCTCAAGCGTAATCGTCTTG 15287
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| || |||||||| || || || |||||
Sbjct 15286 CCAGTAAGAGTCTTGACGAAAATCTGCAT 15258
Score = 107 bits (118), Expect = 2e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||||||| || |||||||||||||| |||||||||||| |||| | | || |||
Sbjct 15922 ACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTGCCATCCTCC 15863
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || || || || |||| ||||| ||||| || || | ||||||||| ||| |
Sbjct 15862 AGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTGA 15803
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | ||||| | ||| ||||| | || || |||||
Sbjct 15802 ATCTTGGACTTGACGTTGTCGATGGTGTCCGAAGACTCAACCTCGAGAGTGATGGTCTTT 15743
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| |||| ||||| || || || |||||
Sbjct 15742 CCAGTCAAGGTCTTGACGAAAATCTGCAT 15714
Score = 102 bits (112), Expect = 6e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||||||| || ||| |||||||||||||||||||||| || |||| | || ||
Sbjct 15238 ACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCATCCTCA 15179
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || || || || |||| ||||| ||||| || || | ||||||||||||
Sbjct 15178 AGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGG 15119
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | |||| ||| ||||| | || || ||||||
Sbjct 15118 ATCTTCGACTTCACATTGTCGATGGTGTCGGACGACTCAACCTCGAGAGTGATGGTCTTG 15059
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| || || ||||| || |||||||||||
Sbjct 15058 CCAGTAAGGGTCTTAACGAAGATTTGCAT 15030
Score = 87.8 bits (96), Expect = 1e-12
Identities = 89/116 (77%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||||||| || || ||||||||| |||||||||||| || ||| |||| ||
Sbjct 15010 ACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCA 14951
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTC 45243
||||| ||||||||||| |||| || || ||||| || || | |||||||||||
Sbjct 14950 AGTTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGAATTCCCTCCTTGTC 14895
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395057456802385
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |