Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq3654 297 2e-75 seq512 199 4e-46 seq1689 120 3e-22 seq347 107 2e-18 >seq3654 Length=7047 Score = 297 bits (328), Expect = 2e-75 Identities = 577/848 (68%), Gaps = 3/848 (0%) Strand=Plus/Minus Query 23031 CAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGAT 23090 |||| ||||| ||||| ||||| ||| || | |||||| ||||| || || || || | Sbjct 3978 CAAG-TTGCACACGGCAACCTCATCTGGGGCAGAGTACTCGACAATCTCTGTGCAAAGGT 3920 Query 23091 TGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGT 23150 || | || || || | || |||||||||| || || ||||| | |||||||| Sbjct 3919 TGGAGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGT 3860 Query 23151 AGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCT 23210 | |||||| | || | || ||||| ||| ||||||| || | ||| | ||| Sbjct 3859 ACAGCATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATGGAGTACCAAAGCTTCT 3800 Query 23211 GAGCGTGAACACGTCGCACGTACCTG-CCTTCTTCCTCGTACTTTTGGTACAACGCGTCA 23269 | || | | ||| || ||| || || | |||||| | | ||| | ||| ||| Sbjct 3799 GGGCCTTGATG-GTCTTGCGACCCTTACCCTCCTTCTCGTAGCTCTCGTAGAGCGCCTCA 3741 Query 23270 AATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCAC 23329 || || | ||||| ||| |||| || || ||| | || ||||||||| |||| Sbjct 3740 AACTCATCGCCGTAGACGTCCGCCAAACCAGGGCATTCGTTGGGGCACATGAGAGTCCAG 3681 Query 23330 ATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGT 23389 || || || || || |||| || ||||| || ||||| ||||||||||||| Sbjct 3680 TCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCAGAGAGCGTAGAACAAG 3621 Query 23390 TCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACG 23449 || ||||| || || ||||| || ||| ||||||| |||| |||| || || || || Sbjct 3620 TCACGGGCACGGACTTCCTCCTTTCCGTGGTTCTTTCTCAAGTCCAGGAACTCAAAGACA 3561 Query 23450 TCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGA 23509 ||||| ||||| ||||||| ||| | ||| || ||||| || | ||| ||||| ||||| Sbjct 3560 TCCGCGTGCCATGGCTCGACGTAGATGGCGAAAGCGCCAGGACGCTTGTTGCCACCCTGG 3501 Query 23510 TCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCG 23569 || ||||| | || ||||||||| | || | ||||| || |||| |||||| || Sbjct 3500 TCAACGTATCTTGCAGTGTTGTTGAAGACACGGAGCATAGGGACGATACCGTTCGAGTTT 3441 Query 23570 CCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATG 23629 ||| || || | | ||| | || || | ||||| || || || ||| Sbjct 3440 CCGTTGGTACCGGCAATGTATGCACCAGTGGCACGGATACGGTGAATGTTCAATCCGATG 3381 Query 23630 CCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATG 23689 ||||| | | || || ||||| || || || || ||||| ||||| ||||| || Sbjct 3380 CCTCCAGCAGTCTTTGAGATCATGGCACACGTCTTGAGTGTGTCATAGATACCCTCAATA 3321 Query 23690 CTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCC 23749 || ||||| || | |||||||||| || || |||| || || | || ||| | || Sbjct 3320 CTATCCTCCTTCATGTCGACCAAGAAGCAGGATGACAGCTGGGCCTGTGGTGTACCAGCA 3261 Query 23750 GAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCG 23809 ||| ||||| ||| ||||| || || ||| ||||| || ||||| || ||| Sbjct 3260 TTGAAGAGTGTTGGGGAAGCGTGTGTGAAATATTTGGAAGACATGAGGTTGTATGTCTCG 3201 Query 23810 ATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGA 23869 |||| ||||| ||||| ||||| || || | ||| || ||||| ||||||| || Sbjct 3200 ATGGTCTTCTCAATATCCTCGCCGTGAATGCCAACGGCAACACGCATAATCATGTGCTGC 3141 Query 23870 GGTCTCTC 23877 || ||||| Sbjct 3140 GGCCTCTC 3133 Score = 127 bits (140), Expect = 2e-24 Identities = 346/529 (65%), Gaps = 3/529 (1%) Strand=Plus/Minus Query 22143 TGGTGCGAAGATAATACATGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCG 22202 |||| || || || |||||||| ||||| || || | |||||| | ||| || || | Sbjct 4867 TGGTACGGAGGTAGTACATGCCGGTCTTGAGGCCAAGCTTCCAACCAGCAAAGTGCATGG 4808 Query 22203 ACGTCAATTTTCCATAACTCGGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGA 22262 | || | || || | || | ||||| | |||| ||||| |||||| | Sbjct 4807 ATGTGATCTTGCCCATTGTTGGGTCCTTCATGTGGATGTTGAGGGACTGGGACTGATCAA 4748 Query 22263 TAAACGCTCCTCGATCGGCGGCCATATTTATCAATGTACGCATCGACATTTCCCATACGG 22322 | || ||||| || || || ||||| | | | |||||| || || ||||| |||| Sbjct 4747 TGAAGGCTCCACGGTCAGCAGCCATCTGGACGATGGTACGCTGGGAGATCTCCCAGACGG 4688 Query 22323 TCTTGTACAGTTGCCTGATCTCTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTAT 22382 ||||||| || | |||| || || || ||| |||||| ||| || | Sbjct 4687 TCTTGTAGAGGGCCTTGATGTCGGCAGGGATGTTGGGGATGTTCTGGATGGAGCCACCGT 4628 Query 22383 TGTGTATGATCAAATTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGA 22442 ||||| || || || | || ||||| ||| ||| || ||| || |||| Sbjct 4627 CCGCGATGATACGGTTCTTCATGTTGTCAGACCACAGACCCATGTCGACCAAGTCCTTGA 4568 Query 22443 CCAGATGACGGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGG 22502 || |||| || ||||| |||||||| | || ||| ||||| ||||||||| | Sbjct 4567 GCAACCAGGGGTTGACTACTTGGAACTCGCCAGCCAGGACACGGCGCGAGTAAATGTTCG 4508 Query 22503 ATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCA 22562 | ||| | || |||||| | || ||| || || ||||| | ||| ||||| || |||| Sbjct 4507 AGGTGTATGGCTCGAAACACTCGTTGAAGCCGAGAATCTGGGAGGTGGAAGCAGTGGGCA 4448 Query 22563 TCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCG 22622 | || || | || || ||||| | | ||||||| || | | |||||| Sbjct 4447 TAGGAGCAACGAGGAGAGAGTTGCGGACACCGTGCTGCTTTATCTGAGCCTTGAGAGAGT 4388 Query 22623 ACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTG 22671 ||||||||||||||||| || || || | ||||||| ||||| || Sbjct 4387 CCCAGTCCCACAGATCGGTAGGGGTAAC---GCCCCACATGTCGTACTG 4342 >seq512 Length=30657 Score = 199 bits (220), Expect = 4e-46 Identities = 555/838 (66%), Gaps = 25/838 (3%) Strand=Plus/Plus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || ||| | |||||||| ||||| || ||||| || ||||||| || || | || || Sbjct 17448 ATCTGGCAGATGTACAAGAAGGCCGAGGCATCTTTCTGGACCGCAGAGGAGATTGATCTC 17507 Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCC---TCAAAGAATCTGAGAGAAATTTTATTAAA 57686 || ||||| || ||| ||| | || |||| || |||| | | || || Sbjct 17508 TCCAAGGACCTTCACGACTGGAACAACCGTCTCAACGACGATGAGCGCTACTTCATCTCC 17567 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 ||||| | || || |||||||| || || || ||||| |||||||| | |||| | Sbjct 17568 CACGTTCTCGCTTTCTTCGCCGCCTCTGACGGAATTGTCAACGAGAACCTCCTCGAGCGC 17627 Query 57747 TTTTCACAAG--AAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCA 57804 || || || | || ||| | | ||||| | ||||| ||||| || ||| | | Sbjct 17628 TT--CAGCAGTGAGGTCCAAATCCCAGAGGCCCGCTGCTTCTACGGTTTCCAAATCATGA 17685 Query 57805 TTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACG 57864 | || ||| | || | || | || || || |||||||| || ||| | ||||| | | Sbjct 17686 TCGAGAACATTCACGCCGAGACATACTCCCTCCTCATCGACACATACATCAAGGAGCAGG 17745 Query 57865 A-CGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCA 57923 | | || || || ||||| || ||||| || || || || |||||||| Sbjct 17746 CTCAACGCACATAC-CTCTTCAATGCCATCGAGACTATTCCTTGCATTAAGAAGAAGGCT 17804 Query 57924 GAGTGGTCAATCAAATGGATAAAAAGCGCCACGG---CCACGTTCGCCGAGAGGCTAATC 57980 || ||| | ||| ||||| || | || || | || || ||| || | || | Sbjct 17805 GACTGGGCTGTCAGGTGGATCCAA---GACAAGGATTCTACCTTTGCCCAGCGTCTCGTT 17861 Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040 || || ||||||||||| ||||| ||||| || ||| ||| || | || || ||| | Sbjct 17862 GCCTTTGCCGCCGTCGAGGGTATCTTCTTCTCCGGCTCCTTCGCATCCATTTTCTGGCTC 17921 Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAG 58100 ||||| || ||||| ||| | |||||||| || |||||| | || || || |||||| Sbjct 17922 AAGAAGCGTGGCCTCATGGCTGGCCTGACCTTCTCGAACGAGCTCATCTCCCGTGACGAG 17981 Query 58101 GGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAA--ACCGACGC 58158 |||||||| ||||| || || ||||| | | ||| ||| |||| | || | || Sbjct 17982 GGTCTCCACACTGACTTCGCCTGCCTCCTCTTCTCCCAC---CTCAAGCACCGCCCAAGC 18038 Query 58159 GGGATCG-CATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACC 58217 || | | || ||| | || ||||| || ||| | ||||| | ||||| | || Sbjct 18039 AAGAAGGCCGTCCAAGACGTCATTACCGAAGCCGTCACCATCGAGCAGGAGTTCTTGACT 18098 Query 58218 GAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAG 58277 || || || || || ||||||| |||||| | |||||| | ||||||||| Sbjct 18099 GAGGCACTTCCCTGTGCTCTGCTCGGCATGAACGCCAACTTGATGAAGCAATACATTGAG 18158 Query 58278 TTTGTTGCCGACAGACTTTTGC--TCGAACTGATTGGAGAGCGTCATTACAACACGAAAA 58335 || || ||||| ||||| ||| || | || |||| || | ||||| ||| | Sbjct 18159 TTCGTCGCCGATAGACTGCTGCTTTCTCTCGGAAACGAGA-AGT-ACTACAAGTCGACCA 18216 Query 58336 ATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGAAAA 58393 | || || || || ||| | ||||| || | ||||||||| ||||| ||||| || Sbjct 18217 ACCCATTCGACTTCATGGAGAACATCTCCCTGGCGGGCAAGACCAACTTCTTCGAGAA 18274 >seq1689 Length=16827 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||| || || ||||| || ||||| |||| ||||| ||||| Sbjct 15030 ATGCAAATCTTCGTTAAGACCCTTACTGGCAAGACCATCACTCTCGAGGTTGAGTCGTCC 15089 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || || || ||||||||| ||| | || || |||||| Sbjct 15090 GACACCATCGACAATGTGAAGTCGAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAG 15149 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || || |||||||| ||| | || || | ||| | ||| || ||| Sbjct 15150 CAGCGCCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGTCGCACTCTCTCCGACTACAAC 15209 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| || || || |||||||| |||| ||| | || | || |||| Sbjct 15210 ATTCAGAAGGAGTCCACTCTTCACTTGGTCCTTCGTCTTCGCGGTGGTA 15258 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| |||||||| || ||||| ||||| || | || || || |||| Sbjct 15258 ATGCAGATTTTCGTCAAGACTCTTACTGGCAAGACGATTACGCTTGAGGTGGAGTCGTCG 15317 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | || | ||||| | || |||||||| ||| | || || |||||| Sbjct 15318 GATACCATTGACAACGTCAAGTCCAAGATTCAAGACAAGGAGGGCATTCCTCCGGACCAG 15377 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || |||||||| || ||| |||| || || || || || ||| Sbjct 15378 CAGCGCCTGATCTTCGCTGGTAAGCAGCTGGAGGATGGCCGCACCCTGTCGGACTACAAC 15437 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || |||||||| ||| |||| || Sbjct 15438 ATTCAGAAGGAGTCGACTCTGCATTTGGTTCT 15469 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| ||||| |||| || || || ||||| |||| ||||| | || Sbjct 15714 ATGCAGATTTTCGTCAAGACCTTGACTGGAAAGACCATCACTCTCGAGGTTGAGTCTTCG 15773 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || ||| ||||| || | || || |||||| Sbjct 15774 GACACCATCGACAACGTCAAGTCCAAGATTCAGGATAAGGAGGGTATCCCACCGGACCAG 15833 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || || ||||| || ||| |||| || | ||| ||||||| || ||| Sbjct 15834 CAGCGCCTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCAGGACGCTGAGCGACTACAAC 15893 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || || || |||||||| |||| || Sbjct 15894 ATCCAGAAGGAGAGCACTCTTCACTTGGTGCT 15925 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| |||||||| || || || || || || | || || || |||| Sbjct 15486 ATGCAAATCTTCGTCAAGACTCTCACCGGAAAGACAATTACGCTGGAAGTCGAGTCGTCG 15545 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | |||| | ||||| || || || ||||| ||| | || || |||||| Sbjct 15546 GATACCATCGATAACGTCAAGTCGAAGATCCAAGATAAGGAGGGCATTCCCCCGGACCAG 15605 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || ||||| ||||| ||| | || ||| ||| || ||||| ||| Sbjct 15606 CAGCGCCTGATTTTCGCGGGCAAGCAGCTCGAGGACGGCCGCACTCTGTCTGATTACAAC 15665 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || || || || || || ||||| || || Sbjct 15666 ATCCAGAAGGAGTCTACGCTACATCTTGTTCT 15697 >seq347 Length=76637 Score = 107 bits (118), Expect = 2e-18 Identities = 168/240 (70%), Gaps = 4/240 (2%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| ||||| ||||| ||||| ||||| || |||||| | || || || |||| Sbjct 19763 CATGCAAATCTTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTC 19822 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | |||| | ||||| | || ||||||||| || | || || ||||| Sbjct 19823 CGACACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCA 19882 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| || || ||||| ||||| ||| | || || || | || || || Sbjct 19883 GCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGTACCCTTTCGGACTACAA 19942 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT----AGAAGCG 31427 ||| || || || || |||||||| |||| || ||||| | || ||| ||||||| Sbjct 19943 CATCCAGAAGGAGTCCACTCTTCACTTGGTCCTGAGACTCCGTGGAGGTGCCAAGAAGCG 20002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445745866885200