Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq3654 125 1e-23
seq512 102 2e-16
>seq3654
Length=7047
Score = 125 bits (138), Expect = 1e-23
Identities = 183/256 (71%), Gaps = 2/256 (1%)
Strand=Plus/Minus
Query 94786 CCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCC 94845
|||| |||||||||||||| ||||| || || | ||| || || ||||| ||||||
Sbjct 3386 CCGATGCCTCCAGCAGTCTTTGAGATCATGGCACACGTCTTGAGTGTGTCATAGATACCC 3327
Query 94846 TCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGG-GTGTGACTGT 94904
||||| ||||| || | | | | | | |||||| || || || |||| |||| |||
Sbjct 3326 TCAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGATGACAGCTGGGCCTGTG-GTGT 3268
Query 94905 TCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATA 94964
||| ||| || ||||| |||||||| || || ||||| | |||||||| | ||
Sbjct 3267 ACCAGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAAATATTTGGAAGACATGAGGTTGTA 3208
Query 94965 TGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCAT 95024
||| || ||| | || || ||||||||||| || || ||||||||||||||
Sbjct 3207 TGTCTCGATGGTCTTCTCAATATCCTCGCCGTGAATGCCAACGGCAACACGCATAATCAT 3148
Query 95025 GTCCTGAGGGCGCTCA 95040
|| ||| || | ||||
Sbjct 3147 GTGCTGCGGCCTCTCA 3132
>seq512
Length=30657
Score = 102 bits (112), Expect = 2e-16
Identities = 288/440 (65%), Gaps = 7/440 (2%)
Strand=Plus/Plus
Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977
||||||||||| || || || || |||||||| || | ||||||||||||||||||
Sbjct 17859 GTTGCCTTTGCCGCCGTCGAGGGTATCTTCTTCTCCGGCTCCTTCGCATCCATTTTCTGG 17918
Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037
||||||| | || | || |||| || |||| ||| || ||| |||| || | |||
Sbjct 17919 CTCAAGAAGCGTGGCCTCATGGCTGGCCTGACCTTCTCGAACGAGCTCATCTCCCGTGAC 17978
Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCA 102097
|| ||||| || ||||| || ||| | || || | | ||| |
Sbjct 17979 GAGGGTCTCCACACTGACTTCGCCTGCCTCCTCTTCTCCCA--CCTCAAGCACCGCCCAA 18036
Query 102098 TCAAGAGAAAGG--ATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTC 102155
|||| |||| | | || | | || ||||||||| || || || || ||
Sbjct 18037 GCAAG---AAGGCCGTCCAAGACGTCATTACCGAAGCCGTCACCATCGAGCAGGAGTTCT 18093
Query 102156 TCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTACA 102215
| || | | || || | | | || |||||| ||| ||||||| || ||||
Sbjct 18094 TGACTGAGGCACTTCCCTGTGCTCTGCTCGGCATGAACGCCAACTTGATGAAGCAATACA 18153
Query 102216 TTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAATGTTA 102275
|||| || || || |||| ||| || || | ||| || ||| |||| || |
Sbjct 18154 TTGAGTTCGTCGCCGATAGACTGCTGCTTTCTCTCGGAAACGAGAAGTACTACAAGTCGA 18213
Query 102276 CCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGAAA 102335
||||||| ||| |||||||| || || ||||| | | ||||||||||| || || |
Sbjct 18214 CCAACCCATTCGACTTCATGGAGAACATCTCCCTGGCGGGCAAGACCAACTTCTTCGAGA 18273
Query 102336 AGAGAGTCGCCGAGTATCAA 102355
|| | |||||||| || |||
Sbjct 18274 AGCGCGTCGCCGACTACCAA 18293
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989537277719175
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |