Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq3654 172 7e-38
seq512 131 2e-25
>seq3654
Length=7047
Score = 172 bits (190), Expect = 7e-38
Identities = 397/593 (67%), Gaps = 4/593 (1%)
Strand=Plus/Minus
Query 63214 CCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTT 63273
|||| | ||| ||||| | || ||||| | | ||| || |||| | || || || |
Sbjct 3718 CCAAACCAGGGCATTCGTTGGGGCACATGAGAGTCCAGTCGCCGTTCTTCTCGACACGCT 3659
Query 63274 TCATAAAGAGATCAGGAATCCAAAGAGC-TATAAATAGATCTCTTGTTCTATGTTCCTCG 63332
|||| ||||||||||| ||||| ||||| || || || || | | | ||||||
Sbjct 3658 TCATGAAGAGATCAGGGATCCAGAGAGCGTAGAACAAG-TCACGGGCACGGACTTCCTCC 3600
Query 63333 TTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAG 63392
||||| |||||| | | || |||||| | | | ||| | ||||| || || | |
Sbjct 3599 TTTCCGTGGTTCTTTCTCAAGTCCAGGAACTCAAAGACATCCGCGTGCCATGGCTCGACG 3540
Query 63393 TATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTA 63452
|| ||||| | | | ||||| || ||||| || ||||| || | |||||| || |||||
Sbjct 3539 TAGATGGCGAAAGCGCCAGGACGCTTGTTGCCACCCTGGTCAACGTATCTTGCAGTGTTG 3480
Query 63453 TTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAG 63512
|| | || | | ||| || | |||||||| || | || |||||||||| || ||
Sbjct 3479 TTGAAGACACGGAGCATAGGGACGATACCGTTCGAGTTTCCGTTGGTACCGGCAATGTAT 3420
Query 63513 CCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATT 63572
| ||| ||||||| ||| ||| | || || || || || | || |||||
Sbjct 3419 GCACCAGTGGCACGGATACGGTGAATGTTCAATCCGATGCCTCCAGCAGTCTTTGAGATC 3360
Query 63573 AATGCGCATCGT-TTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAG 63631
| || || ||| || | ||||||||||| || || || ||||| || |||||| |
Sbjct 3359 ATGGCACA-CGTCTTGAGTGTGTCATAGATACCCTCAATACTATCCTCCTTCATGTCGAC 3301
Query 63632 TAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGC 63691
| || ||| |||| ||| | | || || ||||| || | || || |||||
Sbjct 3300 CAAGAAGCAGGATGACAGCTGGGCCTGTGGTGTACCAGCATTGAAGAGTGTTGGGGAAGC 3241
Query 63692 GTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCA 63751
||| || || |||| ||| | || ||||| ||||| || | || ||||||
Sbjct 3240 GTGTGTGAAATATTTGGAAGACATGAGGTTGTATGTCTCGATGGTCTTCTCAATATCCTC 3181
Query 63752 TTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAA 63804
||||| || || || |||||||| | ||||||||| || || ||| |||
Sbjct 3180 GCCGTGAATGCCAACGGCAACACGCATAATCATGTGCTGCGGCCTCTCAGCAA 3128
>seq512
Length=30657
Score = 131 bits (144), Expect = 2e-25
Identities = 366/558 (66%), Gaps = 8/558 (1%)
Strand=Plus/Minus
Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641
|| ||||| || ||| ||||||||||| | || | ||||| || || || ||
Sbjct 18004 CAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAGAAGGTCAGG 17945
Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701
|| | ||| ||||||||||| || ||||| || ||||| ||||| || ||||| ||||||
Sbjct 17944 CCAGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGATGCGAAGGAGCCGGAGAAGAAG 17885
Query 33702 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGT 33758
|| || || || || |||||||||| || | || || | | | |||| ||
Sbjct 17884 ATACCCTCGACGGCGGCAAAGGCAACGAGACGCTGGGCAAAGGTAGAATCCTTGTCTTGG 17825
Query 33759 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33818
|||||| | |||||| || |||||||| || | ||||| || || || ||||||||
Sbjct 17824 ATCCACCTGACAGCCCAGTCAGCCTTCTTCTTAATGCAAGGAATAGTCTCGATGGCATTG 17765
Query 33819 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 33878
||||| || | || | || || | || || ||||| | || || |
Sbjct 17764 AAGAGGTATGTGCGTTGAGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTC 17705
Query 33879 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 33938
|| | |||||||| || || || || || |||||||| || | ||||| | ||
Sbjct 17704 TCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAGCGGGCCTCTGGGATT 17645
Query 33939 TGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCA 33998
|| || || | | || || || | || || || || ||||| ||| ||| ||
Sbjct 17644 TGGACCTCACTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCAGAGGCGGCG 17585
Query 33999 AAAAACGCCAATACATGTTTTATAAAATA---TTTTTCGTCTGGTGTTA-GTTTATTCCA 34054
|| || || | || || || || || | ||||| | || | | || |||||
Sbjct 17584 AAGAAAGCGAGAACGTGGGAGATGAAGTAGCGCTCATCGTC-GTTGAGACGGTTGTTCCA 17526
Query 34055 ATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 34114
|| | | || || || | ||| | || || | ||||| || |||||||| |||||
Sbjct 17525 GTCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGCGGTCCAGAAAGATGCCTCGGCCTT 17466
Query 34115 TTTATACATATTCCAGAT 34132
|| ||||| | ||||||
Sbjct 17465 CTTGTACATCTGCCAGAT 17448
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629788589026800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |