Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq3654 167 3e-36
seq512 122 1e-22
>seq3654
Length=7047
Score = 167 bits (184), Expect = 3e-36
Identities = 566/872 (65%), Gaps = 10/872 (1%)
Strand=Plus/Minus
Query 65736 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 65795
|||| ||||||| || || ||||| ||||||| | | | || | | |||||
Sbjct 3989 GCAAGGGATGCCAAGTTGCACACGGCAACCTCATCTGGGGCAGAGTACTCGACAATCTCT 3930
Query 65796 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 65855
|||||||| || | |||||| || | || | || || ||||| ||| ||
Sbjct 3929 GTGCAAAGGTTGGAGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAG 3870
Query 65856 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 65915
|||||||| || || ||||| || | || || ||| ||||||| || | ||| | | |
Sbjct 3869 GCATCCTTGTACAGCATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATGGAGTAC 3810
Query 65916 CAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCTTTTC-TCTTTCGTATAG-TGTA 65972
|| | | || | ||||| || | ||| | ||| | || ||| ||| | |
Sbjct 3809 CAAA-GCTTCTGGGCCTTGATGGTC---TTGCGACCCTTACCCTCCTTCTCGTAGCTCTC 3754
Query 65973 TACAATCGT-TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACA 66031
| || || ||||| || || | || | |||| ||||| ||||| | || ||
Sbjct 3753 GTAGAGCGCCTCAAACTCATCGCCGTAGACGTCCGCCAAACCAGGGCATTCGTTGGGGCA 3694
Query 66032 CATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAG 66091
||| | | ||| || |||| | || || || ||||| ||||||||||| ||||| ||
Sbjct 3693 CATGAGAGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCAGAG 3634
Query 66092 AGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAG 66151
||| || || || | || | |||||| ||||| |||||| | | || ||
Sbjct 3633 AGCGTAGAACAAGTCACGGGCACGGACTTCCTCCTTTCCGTGGTTCTTTCTCAAGTCCAG 3574
Query 66152 GAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTT 66211
|||| | | | ||| ||||| || || | ||| ||||| | | | ||||| || ||
Sbjct 3573 GAACTCAAAGACATCCGCGTGCCATGGCTCGACGTAGATGGCGAAAGCGCCAGGACGCTT 3514
Query 66212 GTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAAT 66271
||| || ||||| || | |||||| || ||||| || | || | | ||| || | ||
Sbjct 3513 GTTGCCACCCTGGTCAACGTATCTTGCAGTGTTGTTGAAGACACGGAGCATAGGGACGAT 3454
Query 66272 ACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAAT 66331
||| || || | || ||||| |||| || || ||| | ||||| ||| |||
Sbjct 3453 ACCGTTCGAGTTTCCGTTGGTACCGGCAATGTATGCACCAGTGGCACGGATACGGTGAAT 3394
Query 66332 TGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGT-TTTAACGTATCAT 66390
| || || || || || | || ||||| | || || ||| || | || ||||
Sbjct 3393 GTTCAATCCGATGCCTCCAGCAGTCTTTGAGATCATGGCACA-CGTCTTGAGTGTGTCAT 3335
Query 66391 AGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGAC 66450
|||| ||||| |||||||| ||| |||||| | | || ||| |||| |||
Sbjct 3334 AGATACCCTCAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGATGACAGCTGGGCCT 3275
Query 66451 GACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTA 66510
| || || ||||| || | || || |||||||| || || |||| ||| | |
Sbjct 3274 GTGGTGTACCAGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAAATATTTGGAAGACATGA 3215
Query 66511 GATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCA 66570
| ||||| ||||| || | || |||||| ||||| || || || |||||||
Sbjct 3214 GGTTGTATGTCTCGATGGTCTTCTCAATATCCTCGCCGTGAATGCCAACGGCAACACGCA 3155
Query 66571 TTAACATGTGCTGAGGTCTTTCAACGATCTTG 66602
| | ||||||||| || || ||| | | ||||
Sbjct 3154 TAATCATGTGCTGCGGCCTCTCAGCAACCTTG 3123
>seq512
Length=30657
Score = 122 bits (134), Expect = 1e-22
Identities = 363/557 (65%), Gaps = 6/557 (1%)
Strand=Plus/Minus
Query 36158 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 36217
|| ||||| || ||| ||||||||||| | || | ||||| || || || ||
Sbjct 18004 CAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAGAAGGTCAGG 17945
Query 36218 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 36277
|| | ||| ||||||||||| || ||||| || ||||| || || || || || |||||
Sbjct 17944 CCAGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGATGCGAAGGAGCCGGAGAAGAAG 17885
Query 36278 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTCATGT 36334
|| || || || || |||||||||| || | || || | | | |||| ||
Sbjct 17884 ATACCCTCGACGGCGGCAAAGGCAACGAGACGCTGGGCAAAGGTAGAATCCTTGTCTTGG 17825
Query 36335 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 36394
|||||| | |||||| || |||||||| || | ||||| || ||||| || |||||
Sbjct 17824 ATCCACCTGACAGCCCAGTCAGCCTTCTTCTTAATGCAAGGAATAGTCTCGATGGCATTG 17765
Query 36395 AAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATT 36454
||||| || | || | || || | ||||| || || | || || |
Sbjct 17764 AAGAGGTATGTGCGTTGAGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTC 17705
Query 36455 TCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 36514
|| | |||||||| || || ||||| || |||||||| || | ||||| | ||
Sbjct 17704 TCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAGCGGGCCTCTGGGATT 17645
Query 36515 TGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 36574
|| || || | | || || || | || || || || ||||||||| ||| ||
Sbjct 17644 TGGACCTCACTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCAGAGGCGGCG 17585
Query 36575 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGT--TTGGTGTTA-GTTTATTCCAA 36631
|| || || | || || || || || || | | | || | | || |||||
Sbjct 17584 AAGAAAGCGAGAACGTGGGAGATGAAGTAGCGCTCATCGTCGTTGAGACGGTTGTTCCAG 17525
Query 36632 TCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 36691
|| | | || || || | ||| | || || | ||||| || |||||||| |||||
Sbjct 17524 TCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGCGGTCCAGAAAGATGCCTCGGCCTTC 17465
Query 36692 TTATACATATTCCAGAT 36708
|| ||||| | ||||||
Sbjct 17464 TTGTACATCTGCCAGAT 17448
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658142482915400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |