Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq3654 167 3e-36 seq512 122 1e-22 >seq3654 Length=7047 Score = 167 bits (184), Expect = 3e-36 Identities = 566/872 (65%), Gaps = 10/872 (1%) Strand=Plus/Minus Query 65736 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 65795 |||| ||||||| || || ||||| ||||||| | | | || | | ||||| Sbjct 3989 GCAAGGGATGCCAAGTTGCACACGGCAACCTCATCTGGGGCAGAGTACTCGACAATCTCT 3930 Query 65796 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 65855 |||||||| || | |||||| || | || | || || ||||| ||| || Sbjct 3929 GTGCAAAGGTTGGAGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAG 3870 Query 65856 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 65915 |||||||| || || ||||| || | || || ||| ||||||| || | ||| | | | Sbjct 3869 GCATCCTTGTACAGCATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATGGAGTAC 3810 Query 65916 CAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCTTTTC-TCTTTCGTATAG-TGTA 65972 || | | || | ||||| || | ||| | ||| | || ||| ||| | | Sbjct 3809 CAAA-GCTTCTGGGCCTTGATGGTC---TTGCGACCCTTACCCTCCTTCTCGTAGCTCTC 3754 Query 65973 TACAATCGT-TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACA 66031 | || || ||||| || || | || | |||| ||||| ||||| | || || Sbjct 3753 GTAGAGCGCCTCAAACTCATCGCCGTAGACGTCCGCCAAACCAGGGCATTCGTTGGGGCA 3694 Query 66032 CATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAG 66091 ||| | | ||| || |||| | || || || ||||| ||||||||||| ||||| || Sbjct 3693 CATGAGAGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCAGAG 3634 Query 66092 AGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAG 66151 ||| || || || | || | |||||| ||||| |||||| | | || || Sbjct 3633 AGCGTAGAACAAGTCACGGGCACGGACTTCCTCCTTTCCGTGGTTCTTTCTCAAGTCCAG 3574 Query 66152 GAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTT 66211 |||| | | | ||| ||||| || || | ||| ||||| | | | ||||| || || Sbjct 3573 GAACTCAAAGACATCCGCGTGCCATGGCTCGACGTAGATGGCGAAAGCGCCAGGACGCTT 3514 Query 66212 GTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAAT 66271 ||| || ||||| || | |||||| || ||||| || | || | | ||| || | || Sbjct 3513 GTTGCCACCCTGGTCAACGTATCTTGCAGTGTTGTTGAAGACACGGAGCATAGGGACGAT 3454 Query 66272 ACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAAT 66331 ||| || || | || ||||| |||| || || ||| | ||||| ||| ||| Sbjct 3453 ACCGTTCGAGTTTCCGTTGGTACCGGCAATGTATGCACCAGTGGCACGGATACGGTGAAT 3394 Query 66332 TGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGT-TTTAACGTATCAT 66390 | || || || || || | || ||||| | || || ||| || | || |||| Sbjct 3393 GTTCAATCCGATGCCTCCAGCAGTCTTTGAGATCATGGCACA-CGTCTTGAGTGTGTCAT 3335 Query 66391 AGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGAC 66450 |||| ||||| |||||||| ||| |||||| | | || ||| |||| ||| Sbjct 3334 AGATACCCTCAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGATGACAGCTGGGCCT 3275 Query 66451 GACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTA 66510 | || || ||||| || | || || |||||||| || || |||| ||| | | Sbjct 3274 GTGGTGTACCAGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAAATATTTGGAAGACATGA 3215 Query 66511 GATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCA 66570 | ||||| ||||| || | || |||||| ||||| || || || ||||||| Sbjct 3214 GGTTGTATGTCTCGATGGTCTTCTCAATATCCTCGCCGTGAATGCCAACGGCAACACGCA 3155 Query 66571 TTAACATGTGCTGAGGTCTTTCAACGATCTTG 66602 | | ||||||||| || || ||| | | |||| Sbjct 3154 TAATCATGTGCTGCGGCCTCTCAGCAACCTTG 3123 >seq512 Length=30657 Score = 122 bits (134), Expect = 1e-22 Identities = 363/557 (65%), Gaps = 6/557 (1%) Strand=Plus/Minus Query 36158 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 36217 || ||||| || ||| ||||||||||| | || | ||||| || || || || Sbjct 18004 CAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAGAAGGTCAGG 17945 Query 36218 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 36277 || | ||| ||||||||||| || ||||| || ||||| || || || || || ||||| Sbjct 17944 CCAGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGATGCGAAGGAGCCGGAGAAGAAG 17885 Query 36278 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTCATGT 36334 || || || || || |||||||||| || | || || | | | |||| || Sbjct 17884 ATACCCTCGACGGCGGCAAAGGCAACGAGACGCTGGGCAAAGGTAGAATCCTTGTCTTGG 17825 Query 36335 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 36394 |||||| | |||||| || |||||||| || | ||||| || ||||| || ||||| Sbjct 17824 ATCCACCTGACAGCCCAGTCAGCCTTCTTCTTAATGCAAGGAATAGTCTCGATGGCATTG 17765 Query 36395 AAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATT 36454 ||||| || | || | || || | ||||| || || | || || | Sbjct 17764 AAGAGGTATGTGCGTTGAGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTC 17705 Query 36455 TCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 36514 || | |||||||| || || ||||| || |||||||| || | ||||| | || Sbjct 17704 TCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAGCGGGCCTCTGGGATT 17645 Query 36515 TGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 36574 || || || | | || || || | || || || || ||||||||| ||| || Sbjct 17644 TGGACCTCACTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCAGAGGCGGCG 17585 Query 36575 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGT--TTGGTGTTA-GTTTATTCCAA 36631 || || || | || || || || || || | | | || | | || ||||| Sbjct 17584 AAGAAAGCGAGAACGTGGGAGATGAAGTAGCGCTCATCGTCGTTGAGACGGTTGTTCCAG 17525 Query 36632 TCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 36691 || | | || || || | ||| | || || | ||||| || |||||||| ||||| Sbjct 17524 TCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGCGGTCCAGAAAGATGCCTCGGCCTTC 17465 Query 36692 TTATACATATTCCAGAT 36708 || ||||| | |||||| Sbjct 17464 TTGTACATCTGCCAGAT 17448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658142482915400