Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq3654 158 2e-33
seq512 140 5e-28
>seq3654
Length=7047
Score = 158 bits (174), Expect = 2e-33
Identities = 412/623 (66%), Gaps = 4/623 (1%)
Strand=Plus/Minus
Query 79861 TCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGAC 79920
|| ||||| || || | || || | || ||||| ||||||| || ||||| | | |
Sbjct 3743 TCAAACTCATCGCCGTAGACGTCCGCCAAACCAGGGCATTCGTTGGGGCACATGAGAGTC 3684
Query 79921 CACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC-TATAAA 79979
|| || || | | || || || ||||| ||||||||||| ||||| ||||| || ||
Sbjct 3683 CAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCAGAGAGCGTAGAAC 3624
Query 79980 TAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 80039
|| || | || | ||||| ||||| |||||| | | || |||||| | |
Sbjct 3623 AAG-TCACGGGCACGGACTTCCTCCTTTCCGTGGTTCTTTCTCAAGTCCAGGAACTCAAA 3565
Query 80040 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCC 80099
| ||| | ||||| || || | ||| ||||| | | | || || || ||||| || ||
Sbjct 3564 GACATCCGCGTGCCATGGCTCGACGTAGATGGCGAAAGCGCCAGGACGCTTGTTGCCACC 3505
Query 80100 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 80159
||| || | |||||| || ||||| || | || | | ||| || | ||||| || ||
Sbjct 3504 CTGGTCAACGTATCTTGCAGTGTTGTTGAAGACACGGAGCATAGGGACGATACCGTTCGA 3445
Query 80160 TGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACC 80219
| || ||||| |||| || || ||| ||||||| ||| ||| | ||
Sbjct 3444 GTTTCCGTTGGTACCGGCAATGTATGCACCAGTGGCACGGATACGGTGAATGTTCAATCC 3385
Query 80220 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGT-TTTAACGTATCATAGATGCCCT 80278
|| || || || | || ||||| | || || ||| || | || |||||||| ||||
Sbjct 3384 GATGCCTCCAGCAGTCTTTGAGATCATGGCACA-CGTCTTGAGTGTGTCATAGATACCCT 3326
Query 80279 CTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTC 80338
| || ||||| || |||||| | | || ||| |||| ||| | || |
Sbjct 3325 CAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGATGACAGCTGGGCCTGTGGTGTAC 3266
Query 80339 CCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACG 80398
| ||||| || | || || |||||||| || || |||| ||||| || ||||| |
Sbjct 3265 CAGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAAATATTTGGAAGACATGAGGTTGTATG 3206
Query 80399 TCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGT 80458
|||| || | || |||||| ||||| || || || |||||||| | |||||
Sbjct 3205 TCTCGATGGTCTTCTCAATATCCTCGCCGTGAATGCCAACGGCAACACGCATAATCATGT 3146
Query 80459 GCTGAGGTCTTTCAACGATCTTG 80481
|||| || || ||| | | ||||
Sbjct 3145 GCTGCGGCCTCTCAGCAACCTTG 3123
>seq512
Length=30657
Score = 140 bits (154), Expect = 5e-28
Identities = 368/558 (66%), Gaps = 8/558 (1%)
Strand=Plus/Minus
Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019
|| ||||| || ||| ||||||||||| | || || ||||| || || || ||
Sbjct 18004 CAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAGAAGGTCAGG 17945
Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079
|| | ||| ||||||||||| || ||||| || ||||| || || || || || ||||||
Sbjct 17944 CCAGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGATGCGAAGGAGCCGGAGAAGAAG 17885
Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CGCTGTCATGT 50136
|| || || || |||||||||||||| || | || || | | | | |||| ||
Sbjct 17884 ATACCCTCGACGGCGGCAAAGGCAACGAGACGCTGGGCAAAGGTAGAATCCTTGTCTTGG 17825
Query 50137 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 50196
|||||| | |||||| || |||||||| || | ||||| || || || ||||||||
Sbjct 17824 ATCCACCTGACAGCCCAGTCAGCCTTCTTCTTAATGCAAGGAATAGTCTCGATGGCATTG 17765
Query 50197 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 50256
||||| || | || | || || | || || ||||| | || || |
Sbjct 17764 AAGAGGTATGTGCGTTGAGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTC 17705
Query 50257 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 50316
|| | |||||||| || || || || || |||||||| || | ||||| | ||
Sbjct 17704 TCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAGCGGGCCTCTGGGATT 17645
Query 50317 TGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 50376
|| || || | | || || || | || || || || ||||||||| ||| ||
Sbjct 17644 TGGACCTCACTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCAGAGGCGGCG 17585
Query 50377 AAAAACGCCAATACATGTTTTATAAAAT---GTTTTTCGTTGGGTGTTA-GTTTATTCCA 50432
|| || || | || || || || | | | ||| | | || | | || |||||
Sbjct 17584 AAGAAAGCGAGAACGTGGGAGATGAAGTAGCGCTCATCG-TCGTTGAGACGGTTGTTCCA 17526
Query 50433 ATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 50492
|| | | || || || | ||| | || || | ||||| || |||||||| |||||
Sbjct 17525 GTCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGCGGTCCAGAAAGATGCCTCGGCCTT 17466
Query 50493 TTTATACATATTCCAGAT 50510
|| ||||| | ||||||
Sbjct 17465 CTTGTACATCTGCCAGAT 17448
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718235714743400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |