Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq3654 150 2e-31 seq512 122 1e-22 >seq3654 Length=7047 Score = 150 bits (166), Expect = 2e-31 Identities = 562/871 (65%), Gaps = 10/871 (1%) Strand=Plus/Minus Query 71971 AATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTC 72030 || ||||| ||||| || || ||||| | | ||| || || | | | || || ||| Sbjct 3716 AAACCAGGGCATTCGTTGGGGCACATGAGAGTCCAGTCGCCGTTCTTCTCGACACGCTTC 3657 Query 72031 ATAAAGAGATCAGGAATCCAAAGAGC-TATAAATAGATCTCTGGTTCTATGCTCCTCGTT 72089 || ||||||||||| ||||| ||||| || || || || | || | ||||| || Sbjct 3656 ATGAAGAGATCAGGGATCCAGAGAGCGTAGAACAAG-TCACGGGCACGGACTTCCTCCTT 3598 Query 72090 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTA 72149 ||| |||||| | | || |||||| | | | ||| | ||||| || || | ||| Sbjct 3597 TCCGTGGTTCTTTCTCAAGTCCAGGAACTCAAAGACATCCGCGTGCCATGGCTCGACGTA 3538 Query 72150 TATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATT 72209 ||||| | | | || || || ||||| || ||||| || | |||||| || ||||| || Sbjct 3537 GATGGCGAAAGCGCCAGGACGCTTGTTGCCACCCTGGTCAACGTATCTTGCAGTGTTGTT 3478 Query 72210 ATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCT 72269 | || | | ||| || | ||||| || || || ||||| |||| || || Sbjct 3477 GAAGACACGGAGCATAGGGACGATACCGTTCGAGTTTCCGTTGGTACCGGCAATGTATGC 3418 Query 72270 TCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAA 72329 ||| ||||||| ||| | ||| | || || || || || | || ||||| | Sbjct 3417 ACCAGTGGCACGGATACGGTGAATGTTCAATCCGATGCCTCCAGCAGTCTTTGAGATCAT 3358 Query 72330 TGCGCATCGT-TTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTA 72388 || || ||| || | || |||||||| ||||| |||||||| ||| |||||| | | Sbjct 3357 GGCACA-CGTCTTGAGTGTGTCATAGATACCCTCAATACTATCCTCCTTCATGTCGACCA 3299 Query 72389 GAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGT 72448 || ||| |||| ||| | || || ||||| || | || || ||||||| Sbjct 3298 AGAAGCAGGATGACAGCTGGGCCTGTGGTGTACCAGCATTGAAGAGTGTTGGGGAAGCGT 3239 Query 72449 GCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATT 72508 | || || |||| ||||| || ||||| ||||| || | || |||||| Sbjct 3238 GTGTGAAATATTTGGAAGACATGAGGTTGTATGTCTCGATGGTCTTCTCAATATCCTCGC 3179 Query 72509 GATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTAT 72568 || || || || || |||||||| | ||| ||||| || || ||| | | |||| || Sbjct 3178 CGTGAATGCCAACGGCAACACGCATAATCATGTGCTGCGGCCTCTCAGCAACCTTGCCAT 3119 Query 72569 TTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAA 72626 | | | |||||| || | || || || ||||| || | ||| ||||| Sbjct 3118 CAAGGCGGAGAAGGTAGGACCGCTCAAGGGTCTTGAAGCCAAAGTATTGGTAGTTGAAA- 3060 Query 72627 GTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTATATCCAT 72686 || || ||||||| | | || ||||| | ||| | || ||||| | || Sbjct 3059 -TCACGGTCGTAAAGGACGGCAGAGTTGAGCTCGTCCGCGTGCTTCATAACTGTGTCATA 3001 Query 72687 GGTGATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAA 72746 || | ||| ||| || || || | ||| || || || || | |||| | | | Sbjct 3000 TGTTTTCTTTGCAATCATGGGCGACGGCTTCGAGTTCTTGGGGTTTATGTAGTGGTACAG 2941 Query 72747 ATCCTCCATCACTTCACTA-AATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTA 72805 || | || || || | ||| | || || || | |||||| || || || ||||| | Sbjct 2940 GTCATGGATGAC-CGACGAGAATTGCTTCTTCGTCTGCTTGTGAAGGTTCGACACGGCAA 2882 Query 72806 TTCTGGCGGCTAGAATGGCATAATCTGGATG 72836 | | || || |||||||| || ||||| || Sbjct 2881 TACGTGCAGCCAGAATGGCGTAGTCTGGGTG 2851 >seq512 Length=30657 Score = 122 bits (134), Expect = 1e-22 Identities = 363/557 (65%), Gaps = 6/557 (1%) Strand=Plus/Minus Query 42065 CATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGT 42124 || ||||| || ||| |||||||| || | || | ||||| || || || || Sbjct 18004 CAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAGAAGGTCAGG 17945 Query 42125 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAG 42184 || | ||| ||||||||||| || ||||| || || || || || || || || |||||| Sbjct 17944 CCAGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGATGCGAAGGAGCCGGAGAAGAAG 17885 Query 42185 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTCATGT 42241 || || || || || |||||||||| || | || || | | | |||| || Sbjct 17884 ATACCCTCGACGGCGGCAAAGGCAACGAGACGCTGGGCAAAGGTAGAATCCTTGTCTTGG 17825 Query 42242 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 42301 |||||| | |||||| || |||||||| || | ||||| || || || |||||||| Sbjct 17824 ATCCACCTGACAGCCCAGTCAGCCTTCTTCTTAATGCAAGGAATAGTCTCGATGGCATTG 17765 Query 42302 AAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATT 42361 ||||| || | || | || || | ||||| ||||| | || || | Sbjct 17764 AAGAGGTATGTGCGTTGAGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTC 17705 Query 42362 TCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACC 42421 || | |||||||| || || || || || |||||||| || | |||||| | | Sbjct 17704 TCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAGCGGGCCTCTGGGATT 17645 Query 42422 TGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCA 42481 || || || | | || || || | || ||||| || ||||||||| ||| || Sbjct 17644 TGGACCTCACTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCAGAGGCGGCG 17585 Query 42482 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC--CGGTGTTA-ATTTATTCCAA 42538 || || || | || || || || || || || || || | || ||||| Sbjct 17584 AAGAAAGCGAGAACGTGGGAGATGAAGTAGCGCTCATCGTCGTTGAGACGGTTGTTCCAG 17525 Query 42539 TCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTT 42598 || | | || || || | ||| | || ||| | ||||| || ||||| || ||||| Sbjct 17524 TCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGCGGTCCAGAAAGATGCCTCGGCCTTC 17465 Query 42599 TTATACATATTCCAGAT 42615 || ||||| | |||||| Sbjct 17464 TTGTACATCTGCCAGAT 17448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671108285650600