Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq3654 150 2e-31
seq512 122 1e-22
>seq3654
Length=7047
Score = 150 bits (166), Expect = 2e-31
Identities = 562/871 (65%), Gaps = 10/871 (1%)
Strand=Plus/Minus
Query 71971 AATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTC 72030
|| ||||| ||||| || || ||||| | | ||| || || | | | || || |||
Sbjct 3716 AAACCAGGGCATTCGTTGGGGCACATGAGAGTCCAGTCGCCGTTCTTCTCGACACGCTTC 3657
Query 72031 ATAAAGAGATCAGGAATCCAAAGAGC-TATAAATAGATCTCTGGTTCTATGCTCCTCGTT 72089
|| ||||||||||| ||||| ||||| || || || || | || | ||||| ||
Sbjct 3656 ATGAAGAGATCAGGGATCCAGAGAGCGTAGAACAAG-TCACGGGCACGGACTTCCTCCTT 3598
Query 72090 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTA 72149
||| |||||| | | || |||||| | | | ||| | ||||| || || | |||
Sbjct 3597 TCCGTGGTTCTTTCTCAAGTCCAGGAACTCAAAGACATCCGCGTGCCATGGCTCGACGTA 3538
Query 72150 TATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATT 72209
||||| | | | || || || ||||| || ||||| || | |||||| || ||||| ||
Sbjct 3537 GATGGCGAAAGCGCCAGGACGCTTGTTGCCACCCTGGTCAACGTATCTTGCAGTGTTGTT 3478
Query 72210 ATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCT 72269
| || | | ||| || | ||||| || || || ||||| |||| || ||
Sbjct 3477 GAAGACACGGAGCATAGGGACGATACCGTTCGAGTTTCCGTTGGTACCGGCAATGTATGC 3418
Query 72270 TCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAA 72329
||| ||||||| ||| | ||| | || || || || || | || ||||| |
Sbjct 3417 ACCAGTGGCACGGATACGGTGAATGTTCAATCCGATGCCTCCAGCAGTCTTTGAGATCAT 3358
Query 72330 TGCGCATCGT-TTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTA 72388
|| || ||| || | || |||||||| ||||| |||||||| ||| |||||| | |
Sbjct 3357 GGCACA-CGTCTTGAGTGTGTCATAGATACCCTCAATACTATCCTCCTTCATGTCGACCA 3299
Query 72389 GAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGT 72448
|| ||| |||| ||| | || || ||||| || | || || |||||||
Sbjct 3298 AGAAGCAGGATGACAGCTGGGCCTGTGGTGTACCAGCATTGAAGAGTGTTGGGGAAGCGT 3239
Query 72449 GCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATT 72508
| || || |||| ||||| || ||||| ||||| || | || ||||||
Sbjct 3238 GTGTGAAATATTTGGAAGACATGAGGTTGTATGTCTCGATGGTCTTCTCAATATCCTCGC 3179
Query 72509 GATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTAT 72568
|| || || || || |||||||| | ||| ||||| || || ||| | | |||| ||
Sbjct 3178 CGTGAATGCCAACGGCAACACGCATAATCATGTGCTGCGGCCTCTCAGCAACCTTGCCAT 3119
Query 72569 TTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAA 72626
| | | |||||| || | || || || ||||| || | ||| |||||
Sbjct 3118 CAAGGCGGAGAAGGTAGGACCGCTCAAGGGTCTTGAAGCCAAAGTATTGGTAGTTGAAA- 3060
Query 72627 GTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTATATCCAT 72686
|| || ||||||| | | || ||||| | ||| | || ||||| | ||
Sbjct 3059 -TCACGGTCGTAAAGGACGGCAGAGTTGAGCTCGTCCGCGTGCTTCATAACTGTGTCATA 3001
Query 72687 GGTGATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAA 72746
|| | ||| ||| || || || | ||| || || || || | |||| | | |
Sbjct 3000 TGTTTTCTTTGCAATCATGGGCGACGGCTTCGAGTTCTTGGGGTTTATGTAGTGGTACAG 2941
Query 72747 ATCCTCCATCACTTCACTA-AATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTA 72805
|| | || || || | ||| | || || || | |||||| || || || ||||| |
Sbjct 2940 GTCATGGATGAC-CGACGAGAATTGCTTCTTCGTCTGCTTGTGAAGGTTCGACACGGCAA 2882
Query 72806 TTCTGGCGGCTAGAATGGCATAATCTGGATG 72836
| | || || |||||||| || ||||| ||
Sbjct 2881 TACGTGCAGCCAGAATGGCGTAGTCTGGGTG 2851
>seq512
Length=30657
Score = 122 bits (134), Expect = 1e-22
Identities = 363/557 (65%), Gaps = 6/557 (1%)
Strand=Plus/Minus
Query 42065 CATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGT 42124
|| ||||| || ||| |||||||| || | || | ||||| || || || ||
Sbjct 18004 CAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAGAAGGTCAGG 17945
Query 42125 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAG 42184
|| | ||| ||||||||||| || ||||| || || || || || || || || ||||||
Sbjct 17944 CCAGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGATGCGAAGGAGCCGGAGAAGAAG 17885
Query 42185 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTCATGT 42241
|| || || || || |||||||||| || | || || | | | |||| ||
Sbjct 17884 ATACCCTCGACGGCGGCAAAGGCAACGAGACGCTGGGCAAAGGTAGAATCCTTGTCTTGG 17825
Query 42242 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 42301
|||||| | |||||| || |||||||| || | ||||| || || || ||||||||
Sbjct 17824 ATCCACCTGACAGCCCAGTCAGCCTTCTTCTTAATGCAAGGAATAGTCTCGATGGCATTG 17765
Query 42302 AAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATT 42361
||||| || | || | || || | ||||| ||||| | || || |
Sbjct 17764 AAGAGGTATGTGCGTTGAGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTC 17705
Query 42362 TCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACC 42421
|| | |||||||| || || || || || |||||||| || | |||||| | |
Sbjct 17704 TCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAGCGGGCCTCTGGGATT 17645
Query 42422 TGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCA 42481
|| || || | | || || || | || ||||| || ||||||||| ||| ||
Sbjct 17644 TGGACCTCACTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCAGAGGCGGCG 17585
Query 42482 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC--CGGTGTTA-ATTTATTCCAA 42538
|| || || | || || || || || || || || || | || |||||
Sbjct 17584 AAGAAAGCGAGAACGTGGGAGATGAAGTAGCGCTCATCGTCGTTGAGACGGTTGTTCCAG 17525
Query 42539 TCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTT 42598
|| | | || || || | ||| | || ||| | ||||| || ||||| || |||||
Sbjct 17524 TCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGCGGTCCAGAAAGATGCCTCGGCCTTC 17465
Query 42599 TTATACATATTCCAGAT 42615
|| ||||| | ||||||
Sbjct 17464 TTGTACATCTGCCAGAT 17448
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671108285650600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |