Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq512 201 2e-46
seq3654 163 4e-35
>seq512
Length=30657
Score = 201 bits (222), Expect = 2e-46
Identities = 380/558 (68%), Gaps = 6/558 (1%)
Strand=Plus/Plus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| | |||||||| ||||| |||| || || ||||| | || ||| | |||||
Sbjct 17448 ATCTGGCAGATGTACAAGAAGGCCGAGGCATCTTTCTGGACCGCAGAGGAGATTGATCTC 17507
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
||||||||||| |||| ||| | | ||| | | || |||||| | || || ||
Sbjct 17508 TCCAAGGACCTTCACGACTGGAACAACCGTCTCAACGACGATGAGCGCTACTTCATCTCC 17567
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198
||| || | || ||||| |||| ||| || ||||| |||||||| || || | ||
Sbjct 17568 CACGTTCTCGCTTTCTTCGCCGCCTCTGACGGAATTGTCAACGAGAACCTCCTCGAGCGC 17627
Query 125199 TTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATT 125258
||| ||| | || ||||||| ||||| ||||| ||||||||||||||
Sbjct 17628 TTCAGCAGTGAGGTCCAAATCCCAGAGGCCCGCTGCTTCTACGGTTTCCAAATCATGATC 17687
Query 125259 GAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCG--- 125315
|||||| | ||| | || | ||||| || || |||| ||||| || | |
Sbjct 17688 GAGAACATTCACGCCGAGACATACTCCCTCCTCATCGACACATACATCAAGGAGCAGGCT 17747
Query 125316 CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCT 125375
||||| | | || ||||| || || ||||| || | || | || || ||||||
Sbjct 17748 CAACGCACATAC---CTCTTCAATGCCATCGAGACTATTCCTTGCATTAAGAAGAAGGCT 17804
Query 125376 CAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCA 125435
| |||| | |||||||| | ||| | | ||| | | ||| | | || || ||
Sbjct 17805 GACTGGGCTGTCAGGTGGATCCAAGACAAGGATTCTACCTTTGCCCAGCGTCTCGTTGCC 17864
Query 125436 TTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAG 125495
|| |||||||| ||||| |||||||| || || || || |||| || |||||||||
Sbjct 17865 TTTGCCGCCGTCGAGGGTATCTTCTTCTCCGGCTCCTTCGCATCCATTTTCTGGCTCAAG 17924
Query 125496 AAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGC 125555
||||| || |||||| | || ||||| | |||||| | || || || ||||||||
Sbjct 17925 AAGCGTGGCCTCATGGCTGGCCTGACCTTCTCGAACGAGCTCATCTCCCGTGACGAGGGT 17984
Query 125556 CTACACTGTGACTTTGCC 125573
|| ||| |||||| |||
Sbjct 17985 CTCCACACTGACTTCGCC 18002
>seq3654
Length=7047
Score = 163 bits (180), Expect = 4e-35
Identities = 338/498 (68%), Gaps = 4/498 (1%)
Strand=Plus/Plus
Query 96862 CACGATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAAC 96921
|| |||||||| ||||| ||||| || || || |||||| | ||| ||||| | || |
Sbjct 3488 CAAGATACGTTGACCAGGGTGGCAACAAGCGTCCTGGCGCTTTCGCCATCTACGTCGAGC 3547
Query 96922 CTTGGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGG 96981
| ||||||||||| || ||||| || | || || | || ||| || || || |
Sbjct 3548 CATGGCACGCGGATGTCTTTGAGTTCCTGGACTTGAGAAAGAACCACGGAAAGGAGGAAG 3607
Query 96982 CACGAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCA 97041
|| ||| | |||||||| || || |||||| | || ||| | ||||||||||| |||
Sbjct 3608 TCCGTGCCCGTGACTTGTTCTACGCTCTCTGGATCCCTGATCTCTTCATGAAGCGTGTCG 3667
Query 97042 ACGACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCT 97101
| | ||| |||||| || ||||||||| || | || ||| || | || ||
Sbjct 3668 AGAAGAACGGCGACTGGACTCTCATGTGCCCCAACGAATGCCCTGGTTTGGCGGACGTCT 3727
Query 97102 GGGGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGG-CCGATACGTGAGA 97160
||||| ||||||||||| ||| | ||||||| | ||||| | || |||
Sbjct 3728 ACGGCGATGAGTTTGAGGCGCTCTACGAGAGCTACGAGAAGGAGGGTAAGGGTCGCAAGA 3787
Query 97161 CGAGTCGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAAC 97219
| | || | || | |||| || ||| | |||| | | ||||| ||||| ||||
Sbjct 3788 CCA-TCAAGGC-CCAGAAGCTTTGGTACTCCATTCTCGAGTCTCAGACTGAGACAGGAAA 3845
Query 97220 TCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCAC 97279
|| | ||| || ||||||||| || || ||||| |||||||| || | || ||
Sbjct 3846 CCCTTTCATGCTGTACAAGGATGCCTGCAACCGCAAGAGCAACCAGAAGAACCTCGGTAC 3905
Query 97280 CATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGC 97339
|||| ||||||| || ||||| || ||||| |||||| | | || || ||| ||
Sbjct 3906 CATCCGCAGCTCCAACCTTTGCACAGAGATTGTCGAGTACTCTGCCCCAGATGAGGTTGC 3965
Query 97340 AGTTTGCGTTCTGGCATC 97357
|| ||| |||||||
Sbjct 3966 CGTGTGCAACTTGGCATC 3983
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741025064960600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |