Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq1689 93.3 1e-13 >seq1689 Length=16827 Score = 93.3 bits (102), Expect = 1e-13 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || ||||| || || ||||| || || || || || || || || || |||||||| Sbjct 15904 TCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTGCCATCCTCCAGCTGCTTACCAGCAAAG 15845 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || || | ||| || || || || || || || |||||||||||||| | || || || Sbjct 15844 ATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTGAATCTTGGACTTGACGTTG 15785 Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548 || | ||| || || || ||||| || || || ||||| ||||| | || || || Sbjct 15784 TCGATGGTGTCCGAAGACTCAACCTCGAGAGTGATGGTCTTTCCAGTCAAGGTCTTGACG 15725 Query 104549 AATATCTGCAT 104559 || |||||||| Sbjct 15724 AAAATCTGCAT 15714 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151344037803980