Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq1689 91.5 1e-13
>seq1689
Length=16827
Score = 91.5 bits (100), Expect = 1e-13
Identities = 152/214 (71%), Gaps = 8/214 (4%)
Strand=Plus/Minus
Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCT--CGTCC 48574
||| || ||||| ||||||||||| || |||||||| || || | ||| || | |||
Sbjct 15923 CACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTC-GCTCAGCGTC-CTGCCATCC 15866
Query 48575 TCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCC 48634
|||||||||||||| | | || | |||||||| ||| || | || ||||| |||
Sbjct 15865 TCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATCC 15806
Query 48635 ATAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGG 48692
||| || ||||| | | || ||||| || | |||||| ||||| || ||||
Sbjct 15805 TGAATCTTGGACTTGACGTTGTCG--ATGGTGTCCGAAGACTCAACCTCGAGAGTGATGG 15748
Query 48693 TTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
| || || || | || || || |||||||||||
Sbjct 15747 TCTTTCCAGTCAAGGTCTTGACGAAAATCTGCAT 15714
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCC 48577
|| ||||| || || |||||| ||||||||||| || | || || | ||||||
Sbjct 15466 ACCAAATGCAGAGTCGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCATCCTCC 15407
Query 48578 AGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATA 48637
||||||||||| || | || | |||||||| ||| || | | |||||||| |
Sbjct 15406 AGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCTTGA 15347
Query 48638 ATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTA 48697
|| || ||||| | |||||||| | |||||| ||| | || || || ||
Sbjct 15346 ATCTTGGACTTGACGTTGTCAATGGTATCCGACGACTCCACCTCAAGCGTAATCGTCTTG 15287
Query 48698 CCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|| || ||||| || || |||||||||||
Sbjct 15286 CCAGTAAGAGTCTTGACGAAAATCTGCAT 15258
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421232281213685
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |