Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq1166 105 8e-18 >seq1166 Length=8473 Score = 105 bits (116), Expect = 8e-18 Identities = 111/146 (76%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 19358 CCTGAAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAGGCACATGTGGTATGATT 19417 ||| |||| ||||||||||| |||||| | ||||||||| || |||||| | | Sbjct 6821 CCTCAAATTGGTGATAAGTTCGCTTCTCGCCACGGTCAAAAAGGAACCATTGGTATCACT 6762 Query 19418 TATCGTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGCCGGATCTTATTATTAAC 19477 || || ||||||||||||||||| ||| || ||||| ||||| |||||||| || ||| Sbjct 6761 TACCGCCAAGAAGATATGCCTTTCACTCGTGAGGGTATTGTGCCTGATCTTATCATCAAC 6702 Query 19478 CCACATGCTTTTCCAAGTCGAATGAC 19503 || || || |||| ||| ||||| Sbjct 6701 CCCCACGCCATTCCTTCTCGTATGAC 6676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595844552646000