Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq1689 100 3e-16
>seq1689
Length=16827
Score = 100 bits (110), Expect = 3e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857
||||||||| | ||| ||||| || | ||| || ||||||| || || ||||||
Sbjct 15923 CACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTGCCATCCTC 15864
Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917
|||||| || || ||||||| | | ||||| || || || ||||| || || || |
Sbjct 15863 CAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTG 15804
Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977
||| || | ||||||| | ||| ||||| | || || || | |||||||| ||
Sbjct 15803 AATCTTGGACTTGACGTTGTCGATGGTGTCCGAAGACTCAACCTCGAGAGTGATGGTCTT 15744
Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|||||| | || || || || ||||||||
Sbjct 15743 TCCAGTCAAGGTCTTGACGAAAATCTGCAT 15714
Score = 98.7 bits (108), Expect = 9e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858
||||| |||| ||| || ||||| || | ||| || || || ||| | |||||||
Sbjct 15466 ACCAAATGCAGAGTCGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCATCCTCC 15407
Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918
||||| || || | ||||| | | ||||| || |||||||| || || ||||| | |
Sbjct 15406 AGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCTTGA 15347
Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978
|| || | ||||||| | | | || || | || || |||| ||| || || ||
Sbjct 15346 ATCTTGGACTTGACGTTGTCAATGGTATCCGACGACTCCACCTCAAGCGTAATCGTCTTG 15287
Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
||||||||||| || || || ||||||||
Sbjct 15286 CCAGTAAGAGTCTTGACGAAAATCTGCAT 15258
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448270550586600
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |