Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq3654 181 1e-40
seq512 134 2e-26
>seq3654
Length=7047
Score = 181 bits (200), Expect = 1e-40
Identities = 580/885 (66%), Gaps = 16/885 (2%)
Strand=Plus/Minus
Query 62883 ATGTT--CAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATT 62940
||||| || ||||| ||||||| || || ||||| ||||||| | | | || |
Sbjct 4000 ATGTTGGCAGGGCAAGGGATGCCAAGTTGCACACGGCAACCTCATCTGGGGCAGAGTACT 3941
Query 62941 GTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCT 63000
| ||||| |||||||| || | ||| || || | || | || || ||||
Sbjct 3940 CGACAATCTCTGTGCAAAGGTTGGAGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCT 3881
Query 63001 TTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTA 63060
| ||| || |||||||| || || ||||| || | || || ||| ||||||| || |
Sbjct 3880 TGCGGTTGCAGGCATCCTTGTACAGCATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGA 3821
Query 63061 TAATCGCTTTCCAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCCTTTCTCT--TT 63117
||| | | ||| | | || | ||||| || | ||| | |||| | || ||
Sbjct 3820 GAATGGAGTACCAAA-GCTTCTGGGCCTTGATGGTC---TTGCGAC-CCTTACCCTCCTT 3766
Query 63118 CGTATAG-TGTATACAATCGT-TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACA 63175
| ||| | | | || || ||||| || || | || | |||| ||||| ||
Sbjct 3765 CTCGTAGCTCTCGTAGAGCGCCTCAAACTCATCGCCGTAGACGTCCGCCAAACCAGGGCA 3706
Query 63176 TTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATC 63235
||| | || ||||| | | ||| || |||| | || || || ||||| ||||||||
Sbjct 3705 TTCGTTGGGGCACATGAGAGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATC 3646
Query 63236 AGGAATCCAAAGAGC-TATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCT 63294
||| ||||| ||||| || || || || | || | |||||| ||||| ||||
Sbjct 3645 AGGGATCCAGAGAGCGTAGAACAAG-TCACGGGCACGGACTTCCTCCTTTCCGTGGTTCT 3587
Query 63295 TTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAA 63354
|| | | || |||||| | | | ||| | ||||| || || | ||| ||||| | |
Sbjct 3586 TTCTCAAGTCCAGGAACTCAAAGACATCCGCGTGCCATGGCTCGACGTAGATGGCGAAAG 3527
Query 63355 CTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCA 63414
| ||||| || ||||| || ||||| || | |||||| || ||||| || | || | |
Sbjct 3526 CGCCAGGACGCTTGTTGCCACCCTGGTCAACGTATCTTGCAGTGTTGTTGAAGACACGGA 3467
Query 63415 ACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCAC 63474
||| || | |||||||| || | || |||||||||| || || ||| ||||||
Sbjct 3466 GCATAGGGACGATACCGTTCGAGTTTCCGTTGGTACCGGCAATGTATGCACCAGTGGCAC 3407
Query 63475 GAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGT- 63533
| ||| ||| | || || || || || | || ||||| | || || |||
Sbjct 3406 GGATACGGTGAATGTTCAATCCGATGCCTCCAGCAGTCTTTGAGATCATGGCACA-CGTC 3348
Query 63534 TTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTA 63593
|| | ||||||||||||||||| || ||||| || |||||| | | || |||
Sbjct 3347 TTGAGTGTGTCATAGATACCCTCAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGAT 3288
Query 63594 GACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCAT 63653
|||| ||| | || || ||||| || | || || |||||||| || || ||
Sbjct 3287 GACAGCTGGGCCTGTGGTGTACCAGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAAATAT 3228
Query 63654 TTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCT 63713
|| ||| | || ||||| ||||| || | || |||||| ||||| ||
Sbjct 3227 TTGGAAGACATGAGGTTGTATGTCTCGATGGTCTTCTCAATATCCTCGCCGTGAATGCCA 3168
Query 63714 ACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG 63758
|| || |||||||| | ||||||||| || || ||| | | ||||
Sbjct 3167 ACGGCAACACGCATAATCATGTGCTGCGGCCTCTCAGCAACCTTG 3123
>seq512
Length=30657
Score = 134 bits (148), Expect = 2e-26
Identities = 367/558 (66%), Gaps = 8/558 (1%)
Strand=Plus/Minus
Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363
|| ||||| || ||| ||||||||||| | || || ||||| || || || ||
Sbjct 18004 CAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAGAAGGTCAGG 17945
Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423
|| | ||| ||||||||||| || ||||| || ||||| ||||| || || || ||||||
Sbjct 17944 CCAGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGATGCGAAGGAGCCGGAGAAGAAG 17885
Query 33424 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGT 33480
|| || || || || |||||||||| || | || || | | | |||| ||
Sbjct 17884 ATACCCTCGACGGCGGCAAAGGCAACGAGACGCTGGGCAAAGGTAGAATCCTTGTCTTGG 17825
Query 33481 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33540
|||||| | |||||| || |||||||| || | ||||| || || || ||||||||
Sbjct 17824 ATCCACCTGACAGCCCAGTCAGCCTTCTTCTTAATGCAAGGAATAGTCTCGATGGCATTG 17765
Query 33541 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 33600
||||| || | || | || || | || || ||||| | || || |
Sbjct 17764 AAGAGGTATGTGCGTTGAGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTC 17705
Query 33601 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 33660
|| | |||||||| || || || || || |||||||| || | ||||| | ||
Sbjct 17704 TCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAGCGGGCCTCTGGGATT 17645
Query 33661 TGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCA 33720
|| || || | | || || || | || || || || ||||||||| ||| ||
Sbjct 17644 TGGACCTCACTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCAGAGGCGGCG 17585
Query 33721 AAAAACGCCAATACATGTTTTATAAAATA---TTTTTCGTCTGGTGTTA-GTTTATTCCA 33776
|| || || | || || || || || | ||||| | || | | || |||||
Sbjct 17584 AAGAAAGCGAGAACGTGGGAGATGAAGTAGCGCTCATCGTC-GTTGAGACGGTTGTTCCA 17526
Query 33777 ATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 33836
|| | | || || || | ||| | || || | ||||| || |||||||| |||||
Sbjct 17525 GTCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGCGGTCCAGAAAGATGCCTCGGCCTT 17466
Query 33837 TTTATACATGTTCCAGAT 33854
|| ||||| | ||||||
Sbjct 17465 CTTGTACATCTGCCAGAT 17448
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622918505494600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |