Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq3654 367 3e-96 seq810 84.2 6e-11 >seq3654 Length=7047 Score = 367 bits (406), Expect = 3e-96 Identities = 1118/1704 (66%), Gaps = 34/1704 (2%) Strand=Plus/Plus Query 363443 TTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATG 363502 ||| ||| | |||||||| ||| | ||||||||||| |||| || || || |||| Sbjct 3128 TTGCTGAGAGGCCGCAGCACATGATTATGCGTGTTGCCGTTGGCATTCACGGCGAGGATA 3187 Query 363503 TTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATT-CACGCACGCCACG 363561 |||| | || || ||||| || || | | | | |||| ||| ||||| | Sbjct 3188 TTGAGAAGACCATCGAGACATACAACCTCATGTCTTC-CAAATATTTCACACACGCTTCC 3246 Query 363562 CCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAA 363621 |||||| | | ||||||||| || | | | ||| |||| || ||||| | | | Sbjct 3247 CCAACACTCTTCAATGCTGGTACACCACAGGCCCAGCTGTCATCCTGCTTCTTGGTCGAC 3306 Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681 |||||||| ||| || |||||||||| ||||||||| |||| ||||| | || || Sbjct 3307 ATGAAGGAGGATAGTATTGAGGGTATCTATGACACACTCAAGACGTGTGCCATGATCTCA 3366 Query 363682 AAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAA-CAGTTACA 363739 |||| ||| || || || || | || ||| | | ||||| || | || |||| Sbjct 3367 AAGACTGCTGGAGGCATCGGATTGAACATTCACCGTATCCGTGCCACTGGTGCA--TACA 3424 Query 363740 TTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATA 363799 || ||| || ||| ||||||| || | || || ||||| ||||| || |||| | Sbjct 3425 TTGCCGGTACCAACGGAAACTCGAACGGTATCGTCCCTATGCTCCGTGTCTTCAACAACA 3484 Query 363800 CTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCG 363859 |||| || ||||| ||||||||||| ||||| || || || || || || ||| Sbjct 3485 CTGCAAGATACGTTGACCAGGGTGGCAACAAGCGTCCTGGCGCTTTCGCCATCTACGTCG 3544 Query 363860 AGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGG 363919 |||| || || ||| | |||||||| || || | | || ||| ||||| |||| Sbjct 3545 AGCCATGGCACGCGGATGTCTTTGAGTTCCTGGACTTGAGAAAGAACCACGGAAAGGAGG 3604 Query 363920 AATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCG 363979 || | ||||| ||||| ||||||| || || ||| | |||| | || |||||||| | Sbjct 3605 AAGTCCGTGCCCGTGACTTGTTCTACGCTCTCTGGATCCCTGATCTCTTCATGAAGCGTG 3664 Query 363980 TGGAGGCAGGTAAGA--ATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGA 364037 | ||| | | | | | ||| | ||| | ||||| ||||||| || ||| | | || Sbjct 3665 TCGAG--AAGAACGGCGACTGGACTCTCATGTGCCCCAACGAATGCCCTGGTTTGGCGGA 3722 Query 364038 TGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCG 364097 || | || || || | || || || ||||| | || || |||||| |||| ||| Sbjct 3723 CGTCTACGGCGATGAGTTTGAGGCGCTCTACGAGAGCTACGAGAAGGAGGGTAAGGGTCG 3782 Query 364098 TAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGG 364157 ||||| || || |||||||| |||| |||| | || || |||| ||||||||| Sbjct 3783 CAAGACCATCAAGGCCCAGAAGCTTTGGTACTCCATTCTCGAGTCTCAGACTGAGACAGG 3842 Query 364158 AACACCCTAT-ATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTG 364216 || ||||| | ||| ||||||| ||| | |||||||||||| ||||||| || |||| | Sbjct 3843 AA-ACCCTTTCATGCTGTACAAGGATGCCTGCAACCGCAAGAGCAACCAGAAGAACCTCG 3901 Query 364217 GTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAG 364275 |||| | || |||| |||||| || || |||||| | || ||| | || || || ||| Sbjct 3902 GTACCA-TCCGCAGCTCCAACCTTTGCACAGAGATTGTCGAGTACTCTGCCCCAGATGAG 3960 Query 364276 ACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT--AAAAG----ATGGT 364329 |||||| || ||| | || || | || || || | | ||| | | | | || Sbjct 3961 GTTGCCGTGTGCAACTTGGCATCCCTTGCCCTGCCAACATATGTTGACATGGCCAACGGC 4020 Query 364330 ACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAG 364389 |||| |||| |||| | ||| | || || || | || | | || | ||||| Sbjct 4021 ACTTATGACTTCCAGAAGCTTCACGAGGTCACACAGGTTGTTGTTAAGAACTTGAACAAG 4080 Query 364390 GTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGC 364449 | || ||| || || || || | || ||| || || | ||||| | Sbjct 4081 ATCATTGACGTCAACTACTACCCCGTCGAGGAGGCCAGACGCAGCAACTTCCGTCACAGG 4140 Query 364450 CCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTT 364509 || ||| | ||||||| ||||| || ||||| | || || ||| | | || Sbjct 4141 CCAGTTGCTGTTGGTGTCCAGGGTCTTGCTGATGCATTCCTGGCTCTCCGCCTTCCTTTC 4200 Query 364510 GATTCGCCTGACGCTCGTGTT-CTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGC 364568 ||||| || || || | ||| || || |||||||||| || || || | || Sbjct 4201 GATTCCCCCGAGGC-CAAGTTCCTCAACTCTCAGATCTTTGAGACCATTTACCACGGTGC 4259 Query 364569 AATGACTG-CTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGT 364627 |||| | || |||| || |||| | | | || | ||| || || ||||| | Sbjct 4260 TTTGACCGCCTCCGTG-GAGCTGGCCCAGATTCACGGCACATACGAGACCTACGAGGGAT 4318 Query 364628 CCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGAT 364687 | || | ||| ||||| | |||||| || | ||| || || || | | | | Sbjct 4319 CTCCCGTGTCGAAGGGAGAGCTCCAGTACGACATGTGGGGCGTTACCCCTACCGATCTGT 4378 Query 364688 GGAACTGGGATACGCT--ACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTC---CCT 364742 || ||||||| | || | | || | | ||| |||| ||| |||||||| ||| Sbjct 4379 GGGACTGGGACTCTCTCAAGGCTC--AGATAAAGCAGCACGGTGTCCGCAACTCTCTCCT 4436 Query 364743 CGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTT 364802 |||| || || |||||||| ||||| || | ||||| ||||| ||||||||| || Sbjct 4437 CGTT---GCTCCTATGCCCACTGCTTCCACCTCCCAGATTCTCGGCTTCAACGAGTGTTT 4493 Query 364803 CGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGT 364862 ||| || | || || |||| || ||||| || || | || || || | ||||| Sbjct 4494 CGAGCCATACACCTCGAACATTTACTCGCGCCGTGTCCTGGCTGGCGAGTTCCAAGTAGT 4553 Query 364863 TAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAA 364922 || | | ||||||| | |||| || |||||| ||||| ||||||||| Sbjct 4554 CAACCCCTGGTTGCTCAAGGACTTGGTCGACATGGGTCTGTGGTCTGACAACATGAAGAA 4613 Query 364923 CTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAA 364982 | ||||||||| | ||| || | |||||||| || | || | || | || Sbjct 4614 CCGTATCATCGCGGACGGTGGCTCCATCCAGAACATCCCCAACATCCCTGCCGACATCAA 4673 Query 364983 GCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGA 365042 | | | ||||| ||||| ||||| || ||| ||| || || | | ||||| || || Sbjct 4674 GGCCCTCTACAAGACCGTCTGGGAGATCTCCCAGCGTACCATCGTCCAGATGGCTGCTGA 4733 Query 365043 TCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTC 365102 || || || || || |||| |||||| | ||| | ||||| | ||||| Sbjct 4734 CCGTGGAGCCTTCATTGATCAGTCCCAGTCCCTCAACATCCACATGAAGGACCCAACAAT 4793 Query 365103 CGCCAAGCTTACATCCATGCATTT 365126 | |||| | ||||||||||| || Sbjct 4794 GGGCAAGATCACATCCATGCACTT 4817 >seq810 Length=59582 Score = 84.2 bits (92), Expect = 6e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 65881 GTTCCGTCATAATTGCACATATTATCTTCACTTGCCTTTACAAGACAACGCTGGATGTAA 65940 || || || || ||| ||| |||||| ||||| || |||| ||||||||||||| Sbjct 51552 GTACCATCGTACTTGACCATGACATCTTCCAAAGCCTTGACGAGACGACGCTGGATGTAA 51611 Query 65941 CCACTGTTTGCAGTTTTTACCGCGGTATCAACGAGACCTTCACGCCCGGACATTGCAGAA 66000 ||| | | ||||| || || |||||||||| ||||| ||||| || | ||| || Sbjct 51612 CCAGTTTCGGCAGTCTTAACGGCGGTATCAATAAGACCCTCACGACCAGCCATAGCGTGG 51671 Query 66001 AAGAAAAACTCAGTCGGTTGTAGACC 66026 ||||| ||||| | |||| ||||| Sbjct 51672 AAGAAGAACTCCGACGGTGTAAGACC 51697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303292063381670